Rhizobium binae: J2J99_14980
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Entry
J2J99_14980 CDS
T07180
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rbq
Rhizobium binae
Pathway
rbq00470
D-Amino acid metabolism
rbq00550
Peptidoglycan biosynthesis
rbq01100
Metabolic pathways
rbq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J2J99_14980
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J2J99_14980
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
J2J99_14980
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbq01011
]
J2J99_14980
Enzymes [BR:
rbq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
J2J99_14980
Peptidoglycan biosynthesis and degradation proteins [BR:
rbq01011
]
Precursor biosynthesis
Amino acid ligase
J2J99_14980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
GARS_A
CPSase_L_D2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QSY80994
LinkDB
All DBs
Position
complement(3040745..3041671)
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AA seq
308 aa
AA seq
DB search
MSRKHVAVLMGGFSSERPVSLSSGKACAAALEAEGFKVTCIDVARDVSEKLAALKPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKDKAKLVAAAAGIPVAESQVINR
FAFPSVHPMKPPYVVKPVREGSSFGVVIVTEDQTHPPQVVSSPEWHYGEDVLVERYVYGR
ELTCGVMGETALGVTEVVPQGHNFYDYDSKYAAGGSKHVIPAKISPNIYQKIQTLALRAH
QAIGCRGVSRSDFRYDDRFSEDGEIIWLEINTQPGMTPTSLVPEMAGHAGYSFGEFLRWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaagcatgtcgctgtcctgatgggcggattttcctcggagcggcccgtgagc
ctttcctcgggaaaggcttgcgcagcagccctcgaagccgaaggcttcaaggtgacgtgc
atcgacgttgcgcgcgacgtttccgagaagcttgcggcgctgaagcccgatgttgtcttc
aacgcgcttcacggaccttttggcgaggatggcaccatccagggcatcctcgaatatctc
gagatcccctatacgcattcgggtgtgcttgcctcggcgctggcgatggacaaggacaag
gcgaagctcgtcgcggccgctgccggcattccggttgccgaatcgcaggttatcaaccgt
tttgcctttccttcggtgcatccgatgaagccgccctatgtggtaaagccggttcgcgag
gggtcgagcttcggcgtcgtcatcgtaacggaagatcagacgcatccgccgcaggtcgtc
agctcgcccgagtggcattatggcgaggacgtcctcgttgagcgctatgtctacggccgc
gaactcacctgcggcgtcatgggcgagactgcgcttggtgtcaccgaagtggtgccgcag
ggacacaatttctatgattacgattccaagtatgcggcgggcggttcaaaacacgtcatc
ccggcgaaaatttcaccgaatatttaccaaaaaatacaaacattggctctaagggcgcat
caggcaatcggttgtcgcggcgtcagtcggtccgactttcgttacgacgatcgtttctcc
gaagacggcgaaatcatctggctggagatcaatacccagcccggcatgactccaacctcg
ctcgtgcccgaaatggccggccatgccggttattcctttggtgagtttctccggtggatg
gtggaggacgcgtcttgtttgcgttga
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