Rhizobium brockwellii: RLCC275e_15415
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Entry
RLCC275e_15415 CDS
T09359
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rbw
Rhizobium brockwellii
Pathway
rbw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RLCC275e_15415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbw03400
]
RLCC275e_15415
Enzymes [BR:
rbw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RLCC275e_15415
DNA repair and recombination proteins [BR:
rbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RLCC275e_15415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QJX06274
UniProt:
A0A6M5ZLA1
LinkDB
All DBs
Position
complement(3058086..3059540)
Genome browser
AA seq
484 aa
AA seq
DB search
MRRVVLAGRGELAEWRDAARAFAVAGILPEEIDWREKGEEADLAFQRDAMPPAPVMARKP
MTVPPAFIELAETVLCHFDPARFSLLYRLLWRLQLDRQLLEVASDEDVARARLMAKNVRR
DAHKMTAFVRFKEIDAVSAGRRKFLAWFEPDHHIVRRTAPFFQRRFTDMDWLIATPKGSA
AWDGERLTMSDEPCEKPNLTDATDDLWRTYYASIFNPARLKLKAMQAEMPKKYWKNLPEA
DLIPGLIASAESKVRAMAAREATQSLPFHDRLQEAARSIPAEPEAPAGTLEALGSEAAAC
TRCPLHAKATQTVFGEGPRDAEVMFVGEQPGDQEDISGRPFVGPAGRLLDQVITEAGIDR
STLYVTNAVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLNLEMALIKPKLVVAMGATALAA
LTDAKQRLQDVRGKAIAIDEQRTLFVTVHPSYLLRIPDERLKAEELARFREDMLTIHRLI
LKAA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggtcgtgcttgcaggacgcggggagcttgccgaatggcgtgacgccgcgcgc
gctttcgcagtcgctggcatcctgccggaagagatcgattggcgcgaaaagggcgaggag
gcggaccttgcgtttcaacgcgacgccatgccgccggcgcctgtcatggcacgcaagccg
atgacggtgccgcccgccttcatcgaactcgcggagacagttctctgccattttgacccg
gcgcgtttttccctgctttaccgcctgctctggcggctacaactggaccggcaattactt
gaagtggcttccgacgaggacgtcgcccgtgccaggctgatggcgaaaaacgttcgacgc
gacgcgcataagatgacggccttcgtccgcttcaaagagatcgatgcggtatcggcgggc
cgtcgaaaattcctcgcctggttcgagccagatcaccatatcgtcaggcgcacagcgccc
ttcttccaacggcgcttcaccgacatggactggctgatcgcgacgcccaagggatcggcc
gcgtgggacggcgagcggctgacgatgagcgacgaaccgtgtgaaaaacccaatctcaca
gatgctaccgatgacctctggcgcacttactacgccagcattttcaatccggcgcggttg
aagttgaaggcgatgcaagcggagatgccgaaaaaatactggaagaacctgccggaagcc
gatctcatccctgggctaattgcatcggcggagagcaaggtgcgggccatggccgcccgg
gaggcgacccaatcgttgccctttcacgatcgcctgcaggaagccgcgcgcagcattcca
gctgaacccgaagcgccggcgggcacgctggaagcgctgggctcggaagctgccgcctgc
acccgctgtccgcttcatgcgaaggcgacgcaaaccgtattcggggaggggccgcgcgat
gccgaggtgatgttcgtcggtgaacaaccgggcgaccaggaggatatatcagggcggccc
ttcgtcggtcccgccggcaggcttctcgatcaagtgatcactgaagcgggcatcgaccgc
tcaacgctttacgtcaccaatgccgtcaagcatttcaaatatgagccgcgtggcaagcgt
cgcatccatcagaagcccaatatgggcgaggtgaagcattgccgctggtggctcaatctg
gagatggcgctgatcaaaccgaagctggtggttgctatgggggcgacggcgcttgcggcg
ctgaccgatgcgaaacagcggctgcaggatgtcagggggaaagcgatcgcgatcgacgag
cagcgaacgctcttcgtgacggtgcatccatcctatctgctgcgtattcccgacgagcgg
ctgaaagcggaggaactggcacgatttcgcgaagatatgctgacaattcaccgccttatt
ctgaaggctgcataa
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