Rhodospirillum centenum: RC1_0609
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Entry
RC1_0609 CDS
T00785
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rce
Rhodospirillum centenum
Pathway
rce00470
D-Amino acid metabolism
rce00550
Peptidoglycan biosynthesis
rce01100
Metabolic pathways
rce01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RC1_0609 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RC1_0609 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RC1_0609 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rce01011
]
RC1_0609 (ddlB)
Enzymes [BR:
rce01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RC1_0609 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rce01011
]
Precursor biosynthesis
Amino acid ligase
RC1_0609 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
ACI98044
UniProt:
B6IRF8
LinkDB
All DBs
Position
complement(647049..647996)
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AA seq
315 aa
AA seq
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MGSGIMNQRRPTRVAVLMGGWSAERDVSLVSGRSVAAALEERGYAVTAVDVQRDLPALLH
ALTPKPDVVFNALHGRGGEDGLIQGVLEYLGVPYTHSGVLASALAMNKEMTRRVLAAVGV
PVPDGVTVTREQILAGHPIEPPYVVKPVDEGSSVGVRIVRPGQNQSVLEEGGWAYGERVL
VERFIPGRELTVGVMGDRALAVTEIVPRSGFFDYAAKYTEGEAVHVCPAQIPQDVQEEAL
RLALLAHRTLGCSGVSRSDFRWDDSQAGTGGLYFLETNTQPGFTALSLLPEQAASQGIGF
AELCAWIVEQARCHA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgggatcatgaaccaacgccgcccgacgcgggtggccgtcctgatgggcggc
tggtcggcagagcgcgacgtatcgctggtcagcggccggtccgtcgcggccgcgctggaa
gagcgcggctacgccgtgacagcggtggacgtgcagcgcgacctgccggccctgctgcac
gccctgacgccgaagccggacgttgtcttcaacgccttgcacggccgcggcggggaggac
gggctgatccagggcgtgctggagtatctgggcgtcccctacacccattccggcgtgctg
gcctccgccctggccatgaacaaggagatgacccggcgcgtcctggccgccgtcggcgtg
ccggtgcccgacggtgtgaccgtgacgcgcgagcagatcctggccgggcatccgatcgag
ccgccctatgtcgtgaagccggtggacgagggctcctccgtcggcgtccgcatcgtccgc
cccggccagaaccagtcggtgctggaggagggcggctgggcctatggcgagcgcgtgctg
gtggagcggttcatcccgggccgcgagctgaccgtgggcgtgatgggcgaccgtgccctt
gccgtgacggagatcgtgccgcgctccggcttcttcgactacgccgcgaagtacaccgag
ggcgaggccgtccacgtctgcccggcgcagatcccgcaggatgtccaggaagaggcgctg
cggctggccctgctggcgcaccggaccctgggatgcagcggcgtcagccgcagcgatttc
cgctgggacgacagccaggccggcaccggcggcctctacttcctggagaccaacacgcag
cccggcttcacggccctgtcgctgctgccggagcaggcggcatcgcagggcatcggcttc
gccgagctgtgcgcctggatcgtggagcaggcccgatgccacgcgtga
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