Ruminococcus champanellensis: RUM_10590
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Entry
RUM_10590 CDS
T02600
Name
(GenBank) hypothetical protein
Organism
rch
Ruminococcus champanellensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_5
Dockerin_1
LRR_8
Motif
Other DBs
NCBI-ProteinID:
CBL17216
UniProt:
D4LC71
LinkDB
All DBs
Position
complement(1154969..1157296)
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AA seq
775 aa
AA seq
DB search
MIIRKFFSIVITVCLSLASIPLIPHSMIAEAATTTSGTCGDNLTWNFSDGVLTISGVGTM
MEGELYSDYPWADIRLSITEVVIEEGVKSIGKDAFRIAMALTSVHLPSSVERISESAFAD
CDRLMSIAVATSNPYFASSNGILYNNDKTTLLIYPGGKSEKCYIIPDGVTSIGNYAFYSC
DKLKTVTIPSSVKKIDAYAFRLCESLIQVNTTDGLISIGDYAFAGCRALRAFNTPGTVTS
IGAYAFSSCTRLKTVNLPDSLTNIGKFAFYSCDELENIHIPESIITLNDGVFGRCESLSS
IIIPKNITNIGYYAFGYCQKLSSVVIFGDVESIGDMAFAGCTSLATIAINGPESEIFDAE
STINSNVVIYGHSGSTAQSYAKKYDRLFHELLSGTCGDNVEWILTPNGTLTIAGNGAMKN
SQAFYNYNAPWRDEFLTNVIIDDGVTGIGAFSFKDCFDLKQVAIPDSLTSIGGYAFCNCE
ALMSLNIPASVVHIGELAFEDCRRMGSVGIENPDCEIFGAKDTLYPGSVVYGYKSSTAES
YAKEYGRKFVECNIGSCGESLTWKYLDGALTISGTGEMTDYSFISSPPWKKYQDKITKVI
IEEGVENVGDWAFRYFNNINSVIIPDSITSIGTWAFGDCYQLTSVILPENVTKVDIVAFE
NCCNLQSVSIYNPDCEIYGHRNTIPSDIIYGYQGSTAESYSKNYSISFIPLDTFLVKGDV
NADGIFDIADVVLLQKWLLAVPNTHLADWKAADFCEDEKLDVFDLCLMKRKLING
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgattataagaaagtttttttccatagtgattacagtatgtttgagcttggcaagcata
ccgctaatacctcatagcatgattgctgaagcggcaaccaccacctctggtacttgtggc
gacaacctgacatggaatttttcagatggtgttctgacgatttctggtgttggcactatg
atggagggagaattgtactccgactacccgtgggcagatattcgccttagcatcacagag
gttgtgattgaagaaggcgtcaaaagcattggaaaggatgcatttaggattgcaatggcc
ctaacttccgttcatcttccgtcgagcgtggaacgcatcagtgagagtgcatttgctgat
tgtgataggcttatgtccattgctgttgctacaagcaatccttatttcgcaagcagcaac
ggaatattatataataatgataagactactttgctgatatatccaggaggcaagagtgaa
aaatgctacatcattcctgatggtgtaacgtcaattggaaattacgcattctatagctgc
gacaaactcaaaaccgtcacgattccttccagcgtgaagaaaatcgacgcttatgcgttc
cggctctgcgaaagtctgattcaggtcaatactacagacgggcttattagcattggcgac
tatgcctttgccggatgtcgtgctctcagggcattcaatactcctggaacggtgacgagt
atcggggcatatgcgttcagttcatgtacccgattgaaaactgtcaatcttccggatagt
ctgacaaatatcggtaagtttgcattttacagctgcgatgaacttgaaaacattcatatt
cctgaaagtatcataactctcaacgatggcgtgttcggacgatgcgaaagtctaagctcc
atcatcattccaaaaaatatcacaaacatcggctattacgcttttggctattgtcagaag
ctttcctcggttgtgatattcggtgatgtggagagtatcggggatatggcatttgccggc
tgtactagtcttgccaccattgccataaatggccccgaaagcgagatttttgatgctgaa
agcacaattaacagcaatgttgtgatttacggtcacagcggttcaaccgcacagagctat
gcgaaaaaatatgatagactttttcatgagctattaagcggtacctgcggtgataatgtg
gaatggatactcactccaaacggcacactgacaattgcgggaaatggagcaatgaaaaat
tctcaagcattttataactacaatgcgccgtggcgtgatgaattccttacgaatgtcatc
attgatgatggcgttacaggaataggcgcgttttcctttaaggattgcttcgatctgaaa
caggttgccatccctgacagcttgacgagtattggaggatatgcattctgcaactgtgag
gctctcatgtcattaaatattccagcaagtgtagtacatatcggtgaactcgcctttgag
gattgtagaagaatgggatctgtcggaatagaaaaccccgactgtgagatttttggtgcg
aaagatacactgtaccctggttcagtagtttatggctacaagagttctacagcagaaagc
tatgccaaagaatatggcagaaaatttgtggagtgcaatatcggatcctgtggcgaatcg
cttacttggaagtatctggatggagcgcttacaatctctggtactggtgaaatgacagat
tattcctttatatcttctcctccgtggaaaaagtatcaggacaaaatcacaaaagtaatc
atcgaagaaggtgtggaaaatgtcggcgattgggcattcagatattttaataacatcaac
tctgtcatcattcctgatagcataacaagtattggaacatgggcgtttggagactgctat
cagcttacctctgtgatccttccagaaaacgtaactaaagtggatattgttgcctttgaa
aattgttgtaatctgcaatctgtttcaatctataatccagattgtgagatttatggtcat
cggaataccattccatctgacataatctatggttatcaaggctctacagcggaaagctat
tcaaagaattatagcatttcgtttatcccacttgatactttccttgtaaaaggtgatgtc
aatgctgacggaatatttgatattgctgacgtagtattacttcaaaaatggttgcttgca
gttcctaacacgcatcttgccgactggaaggcagctgacttctgtgaagatgagaaactg
gatgtattcgatctctgtttgatgaagcgtaagttgataaacggataa
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