Methanocella arvoryzae: RCIX2376
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Entry
RCIX2376 CDS
T00526
Symbol
fdhB-3
Name
(GenBank) formate dehydrogenase, beta subunit
KO
K00125
formate dehydrogenase (coenzyme F420) beta subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
rci
Methanocella arvoryzae
Pathway
rci00680
Methane metabolism
rci01100
Metabolic pathways
rci01120
Microbial metabolism in diverse environments
rci01200
Carbon metabolism
Module
rci_M00357
Methanogenesis, acetate => methane
rci_M00567
Methanogenesis, CO2 => methane
rci_M00617
Methanogen
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
RCIX2376 (fdhB-3)
Enzymes [BR:
rci01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
RCIX2376 (fdhB-3)
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
RCIX2376 (fdhB-3)
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Gene cluster
GFIT
Motif
Pfam:
FrhB_FdhB_C
FrhB_FdhB_N
Fer4_8
Fer4_17
Fer4_9
Fer4_10
Fer4_4
Fer4_7
Fer4
Fer4_2
Fer4_21
Fer4_6
Fer4_20
DUF6359
Motif
Other DBs
NCBI-ProteinID:
CAJ37469
UniProt:
Q0W2C4
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All DBs
Position
775909..777018
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AA seq
369 aa
AA seq
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MVKVKDMFYACATEENICKAGECGGAVTALLKYALESKMVDAVVAITRGADLYDGVPTVF
TNPADLVKSAGSLHCAPTAIGKFIVQYMNGAKDMKIALPVKQCDASAILAAAKQGKVNRN
NILMIGLNCGGTVRPVIGRDMIEKYYGVSPDDVIKEEIAKGKFIIVTKNHEHKEVSIDEL
EEHGSGRRQNCQRCDIKIPTMADLACGNWGVIGPLAGKATFVEVCSENGAKLMEGATNAK
AITTQAPDPKGIEMRAKINESMIKLAAKHQKKHFSEAADPAFWASHFSKCVKCQGCTVNC
PVIFDLKLKPMAFEGMGDIPPSMGYHMARLAALGNNCINCGMCEDGCPVEIPLSRLYHEV
AKRIGQEIS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaagtcaaggacatgttctacgcctgcgccacagaggagaacatatgtaaggcc
ggcgagtgcggcggagcagtcaccgcactgctgaagtacgcgctggagagcaagatggtc
gacgctgtagtcgccatcaccaggggcgcagacctgtacgacggcgtacccacggtcttc
accaacccggcagacctcgtcaagtccgcaggctcgctccactgcgcacccacggccatc
ggcaagttcatcgtccagtacatgaacggggccaaagacatgaagatcgcactgccggtc
aagcagtgcgacgccagcgctatcctcgccgcggcgaagcagggcaaggtcaacaggaac
aacatcctgatgatcggcctcaactgcggcggcacggtccgcccggtcatcggcagagat
atgatcgaaaagtactacggcgtcagcccggacgacgtgatcaaggaagagatcgccaag
ggtaagttcatcatcgtgacgaagaaccacgagcacaaggaagtctcgatcgacgagctg
gaagagcacggcagcggccgcaggcagaactgccagcggtgcgacatcaagatccccacc
atggcggatctggcgtgcggcaactggggtgtcatcgggccgctggccgggaaagccacc
ttcgtggaagtctgcagtgagaacggtgccaagcttatggaaggcgccaccaacgctaag
gctatcacgacccaggctcctgacccgaagggcatcgagatgcgcgccaagatcaacgag
tcgatgatcaagctcgccgcgaagcaccagaagaagcacttctcggaggctgcagacccc
gctttctgggcaagccacttcagcaagtgtgtcaagtgccagggctgcacagtcaactgc
cccgtcatcttcgacctgaagctgaagcccatggccttcgaaggaatgggcgacatcccg
ccttcgatgggctaccacatggccaggcttgcggcgctcggcaacaactgcatcaactgc
ggcatgtgcgaagatggctgcccggtagagatcccgctctccaggctgtatcacgaagtc
gcgaagcgcatcggacaggagatcagctaa
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