Rosa chinensis (China rose): 112164726
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Entry
112164726 CDS
T06020
Name
(RefSeq) endochitinase A isoform X1
Organism
rcn
Rosa chinensis (China rose)
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Gene cluster
GFIT
Motif
Pfam:
BAH
PHD
Prok-RING_1
C1_2
zf-HC5HC2H
C1_1
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
112164726
NCBI-ProteinID:
XP_024156788
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All DBs
Position
5:complement(36459764..36465305)
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AA seq
1029 aa
AA seq
DB search
MDLAADEPPRVEKRPIQNGAGGELGPQLSKKPRLGPDCERDLKRVAEIVLALSTMAKIRG
GEKPTEPEIGLMEEARAKLVELCEGLPPKEIVAKDAISAVIEDLGLNAKLNEQRLGFRGP
KLTIAEKFALTKRKMDESKKYAAQTAAYPSQPLKTSFNVAAENHGLPHTVRISTDNPNHA
PISTGGFAASPLVHVSTVTPTSAQYQLPTSEIRTTMVSGSVPGSHLGRDSSSPAFPRGER
VQLRTDGGSNGSSYAYQVQANSSANHPPVSAPTWPTQTQGGPENKVPNHTSVKVEGTTGM
SKPSVTPLAARDQNSRSFASQPSSGHLPGGHQSSQKIRFVQASSVPNNHTEIARIIQKLL
QPQLPDHPTWIPPSRDYMSKALTCQTCQISINEVDNVLICDACEKGYHITCAQSPNQRGI
PRGEWHCTRCLSLSNGKPLPPKYGRVMRSNIQLKAGTIPSSTVASSTVPSSTVPSSTIAS
STAPSSTVPSSMAVVQMSSGNKVGALDPKVYEQKINAHVSSVFQNPAHLVGVGTNNIKSA
TDSKVSFAMQGNNLPSSSVNADEKPLSGSFLLSETSSQQIGNSELSTSDKRPMESRAEPS
SDLSNKDADPKISTASETEGTNFPSSSKTTDEKILSGSFQSGERTSQQRDISESFKSDKR
PSESRAESPTDLPNKDSDPNILSATETQGNNFPSSSQSTDEKPVSGSFMSSERSSREIDN
SESSRLFESSTEPPADLSNKDADSKISNAREMQGNNFSTSSKGINEKPLPGSFPSSESSS
QQTDNSELSILDKIPYESKTEPPADLPNEDIDKSVPSQPVSNSEVVDRAGAPNCGENSSC
SIRDDQGLAQEHTSEGLVVSGGALEHTGFTSDGLRPVEWIGDSIQDVSEKNFYRSCRIDG
VTYELQEHALFQSSHGKLIPSKLQSMWEDRKTGSKWVIVNSCYFPSDLPEHVSRPSTPES
NEVYESNHETTVMAGLIQGPCEVLPPAKFSEEIERRSQLGHDTNNELRPVFLCKWNYDEF
KGLLQTVSQ
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggatctggccgcagacgagccgcctagggttgagaagaggccgattcagaacggcgcc
ggcggagaattggggccccagctgagcaagaagcccagattggggcccgattgcgagagg
gacttgaagagagtggcggagattgtgctggctttgtcgaccatggcgaaaattcgaggc
ggagagaagccgacggagccggagattgggcttatggaggaggctagggcaaagctggtg
gagctgtgcgagggtttgccgcccaaggagattgtggcgaaggatgcgatttcggctgtg
attgaggatttggggcttaatgccaagctcaatgaacagagattagggtttcggggtccc
aagttgacgattgcggagaagtttgcactcactaagaggaagatggatgaatccaagaaa
tacgctgcgcaaaccgctgcatatccatctcaaccattaaaaacaagcttcaatgtagca
gctgaaaaccatgggttgccacatactgttcgtatttcaacagataacccaaaccatgca
cctatttcaactggtggtttcgcagcgtctcctcttgttcatgtttccacagtaactcct
acatctgcacagtatcagttgcccaccagcgaaattagaacaactatggtttctggcagt
gtgcctggtagtcatctgggaagagattcatcttccccagcatttcctagaggtgaaaga
gtgcaattaagaactgatggaggatccaatggatcttcttatgcatatcaagtacaagca
aattcttcggcaaatcatccaccggttagtgctccaacttggcctacacaaactcaaggt
ggaccagaaaacaaggtgccaaatcatacttctgtcaaggttgaaggaaccactggtatg
agtaaaccatcagtgactcctctagcagcacgagatcagaattctaggtcatttgcctct
caaccatcttctggacatttgcctggtggacaccagtcttcacaaaagattcgctttgtt
caagcttcttcagttcctaataatcacactgaaattgcgagaattattcagaaattattg
caaccacagctgcctgatcatcccacatggatccctccatcaagggattatatgagtaag
gctttgacttgccaaacttgccagattagcatcaatgaggtagataatgttcttatttgt
gatgcatgtgagaaaggatatcacattacgtgtgcacaatcacctaaccagagaggaatt
cctcgaggtgaatggcactgcacaagatgcttgtcactaagcaatggaaagcctttgcct
cctaagtatgggcgtgttatgagaagcaatatacaattaaaagccggcacgatcccttcc
agtacagtcgcttccagcacagtcccctccagcacagtcccttccagtacgatcgcttcc
agcacagccccttccagtactgtcccttccagcatggctgtagttcagatgtcctcaggg
aataaagtgggagctttagatccaaaggtctatgagcagaagataaatgcacatgtaagc
tctgttttccagaatcctgctcatttggttggtgtgggcacaaacaatattaagtcggca
acagattcaaaagtttcatttgcaatgcaagggaataatttaccatccagcagtgtaaat
gcggatgagaaacctctttctggaagtttcctgttaagtgaaacatcatctcaacaaata
ggtaattctgaattatctacatcggacaagagacctatggaatcaagagcagaaccttct
tctgatttgtcaaacaaagatgctgatcccaagatttcaactgcaagtgaaactgaaggg
actaattttccatcaagcagtaaaactacggatgagaaaattctttctggaagtttccag
tctggtgaaaggacatctcaacagagagatatttctgaatcattcaaatctgacaagaga
ccttctgaatcaagagcagaatcacctactgatttacccaacaaagattctgatccaaat
attttaagtgcaacagaaacacaagggaataatttcccatcaagcagtcaaagtacagat
gagaaacctgtttctggaagtttcatgtctagtgaaagatcctctcgagaaatagataat
tctgaatcatctagactatttgaatcaagcacagagcctcctgctgatttatccaacaaa
gatgctgattcaaaaatttcaaatgcaagagaaatgcaaggtaataatttctcaacaagc
agcaagggtataaatgagaaaccgcttcctggaagtttcccgtctagcgaaagttcatct
caacaaactgataattctgaattatctatattagataagataccttatgaatcaaaaaca
gagcctcctgctgatttacccaatgaagatattgataagtctgttccttctcagccagtt
tctaactcagaagttgttgatcgagcaggagctccaaactgtggagaaaattctagctgt
tctattagagatgaccaaggtcttgcgcaagaacatactagtgaaggtcttgtagtcagt
ggtggggcactagagcatactggatttacttctgatggcttgcgacctgttgaatggatc
ggtgattcaattcaagatgtcagtgaaaaaaacttctatcgttcttgtcgcattgatgga
gtaacatatgagctacaagaacatgctctcttccagtctagtcatggcaaattgataccc
tctaagcttcagtcaatgtgggaggacaggaaaactgggtcaaagtgggttatagttaac
agttgctactttcctagtgacttaccagagcatgttagtcgtccatctacacctgaaagt
aatgaggtgtacgaatctaatcatgaaacaactgtaatggcgggcttaattcaaggtcca
tgtgaagttcttcctcctgctaagttcagtgaagaaattgaaagacggagccaattagga
catgatacaaataatgaactacgaccagttttcctgtgcaaatggaattatgatgagttc
aaagggttattgcagactgtttcccagtaa
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