Rosa chinensis (China rose): 112166314
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Entry
112166314 CDS
T06020
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112166314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112166314
Membrane trafficking [BR:
rcn04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
112166314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
NACHT
AAA_22
AAA_5
AAA_19
AAA_14
RuvB_N
RNA_helicase
IstB_IS21
nSTAND3
Mg_chelatase
AAA_25
AAA_11
NB-ARC
AAA_33
AAA_7
ATPase
AAA_3
AAA_30
KTI12
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
112166314
NCBI-ProteinID:
XP_024158894
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All DBs
Position
5:14426297..14433782
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AA seq
1117 aa
AA seq
DB search
MEFEVKLVGAIEDCYVSLPLPLIQTLHSSSPSLPPVLALDLRSSSNDDRWTVAWSGATSS
SPAIEVAQQFGECISLPNRSRVQVRALSNVAKATLVSIEPSTEDDWEVMELNSELAEAAI
LNQVRIVHEGMKFPLWLHGRTTITFLVVSTFPKKSVVQLVPGTEVAVAPKRRKNVNSNGD
GMLSSNISKALLRVQDADRRLVHQSNVKGVELGVVLTSVAIIHPETAKMFSLQSLELVAV
VPRLVPKESMKNSESDGLRIRSSTTKESSVRVPNDKKDNRQAVVRLLISDSVAKGHLMIA
QSLRLYLRAGLHSLVYLKGCGAILKNNMPLCSLSPCHFKISPKEKAVERNGLQVLDRHIT
RKKNDMLLTPGSSTYIDVVDWSTHDKVVADFSCKEDEEPAHQSDKGNGVESLLKAWILAQ
LDAITSKAGVEVNSLILGNETLLHFEVKGNQSGIEESSNDFLANNNMNPEVPVEVLYVLT
ISKESQCGGNVYELVFDERNKGNNNNLDSLEKHMGEPVSFYSVRERMSDKDITSDISSLS
WMGTTASEVLNRMLVLLTPVYGVWFSSHNLPLPGHVLIHGPPGSGKTLLARTVGKCLEEH
GGLLAHIVYVCCSQLAMEKALTVRQALSSYISEALDHAPSLVILDDLDSIVSSSSESEGS
QPSTSVVALAEFLIDIMDEYGEKRKISCGIGPLAFIASSKSLESIPQSLSSSGRFDFHVQ
MPAPAASERAAILKHEIRRRCLQCSDEILQDVASKCDGYDAYDLEILVDRTVHAAIGRFL
PYQFASDEREKPTLLADDFSRAMHEFLPVAMRDITKSASEGGRSGWDDVGGLVDIRNAIK
EMIELPSKFPNIFAKAPLRLRSNVLLYGPPGCGKTHIVGSAAAACSLRFISVKGPELLNK
YIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEV
LTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILTVLSKKLPLDGDVDLS
AIADMTEGYSGADLQALLSDAQLAAVHEILDGTYTNDPGRKPVISDALLKSTASRTRPSV
SEAEKQKFYDIYSQFLDSKRSVAAQSRDAKGKRATLA
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgaggtgaaattagtcggtgccatagaggactgctacgtctccctccctctc
cccctaatccaaaccctccactcctcctccccatcgctccctcccgtcctcgccctcgac
ctccgctcctcctcaaacgacgaccgctggaccgtcgcttggtccggcgccacctcctct
tctcccgcaatcgaggtagctcagcaattcggagagtgtatttcgctgccgaatcgttcg
agggttcaggtgcgagctctttcgaatgtcgcgaaagctactttggtgtcgattgagccg
tctactgaggatgattgggaggtcatggagcttaactccgagcttgctgaggctgctata
ttgaatcaggtgaggattgttcatgaaggaatgaagtttcctttgtggttgcatggccgc
accaccattacatttcttgttgtttcaacctttcccaagaaatcggtggtgcaactggtg
ccagggactgaagtagcagttgctccaaagagacgcaagaatgtcaactcgaatggggat
ggaatgctctcgtctaatatttcaaaagcactactccgtgttcaagatgcagacaggaga
ttagttcaccaaagtaatgtgaaaggtgttgagcttggagttgttctcacttctgttgct
attattcacccagaaacagcaaaaatgttctcattacagtctcttgagttagtagctgtt
gtgccgagattggtaccaaaagaaagcatgaaaaattctgaaagtgatgggttgagaata
agaagttcaacaacaaaggaatctagtgttagagttccaaatgacaaaaaggacaatcgt
caagcagtagttcggctgttgatttccgactcagttgctaaagggcatctaatgattgcc
cagtctcttcgcctctaccttagggctggtttgcattcattggtttatttaaagggatgc
ggtgctattttgaagaataacatgccattgtgttcactttcaccctgccacttcaagata
tctcctaaagagaaagctgttgaaagaaatggtttacaagttcttgacagacatataact
cgtaagaagaatgacatgcttctaacacctggctcaagcacctatatagatgttgttgat
tggtcaacccatgacaaagttgttgccgatttttcttgcaaagaggatgaagaacctgcc
catcagtctgacaagggaaatggagtagaaagtctacttaaagcttggatccttgcacag
ttagatgctattacttccaaagcaggagtagaagttaattcattgattttgggaaatgaa
actttgcttcattttgaagtgaaagggaaccagtctgggattgaggaatcatcaaatgat
ttcctggcaaacaataatatgaatcctgaagttccagttgaagtcttgtatgtattgaca
atttccaaggaatctcaatgtggcggaaatgtgtatgagcttgtatttgatgaaagaaac
aaaggcaacaacaataatcttgactcacttgaaaagcatatgggtgaacctgtgtccttt
tattcagtaagagaaagaatgtctgacaaggatattacttctgatatatcttccttgagc
tggatggggacaactgcttctgaagttttaaatagaatgttggtgttgctaactcctgtt
tatggggtatggtttagttcacataatcttcctctccctggacatgttctgatacatgga
cctccgggttctggaaagacattattagcgagaactgttggaaaatgtcttgaggaacat
ggaggtcttctagcacacatagtttatgtatgctgttctcaacttgccatggaaaaggcc
ttgaccgttcgccaagcactctctagctacatatctgaggctttagatcacgcaccatct
cttgtaattcttgacgatcttgatagcattgtttcatcctcttcagaatcagaaggatct
caaccttcaacttctgttgttgcactagcagaatttctcatagacattatggatgaatat
ggggaaaaaaggaagatctcctgtggaattggcccccttgctttcatagcttcctcaaag
tcattagagagtataccacagtcattgagctcttcaggtaggtttgactttcatgtccaa
atgcctgctcctgctgcctcagaacgtgcagccattttgaaacatgaaattcggaggcgt
tgcttgcaatgttctgatgaaatcttacaagatgtagcttccaaatgtgatggctatgat
gcatatgatctggaaatcttggttgatagaactgtccatgccgccataggtcgttttctg
ccttatcagtttgcttctgatgagcgtgaaaaacccactttacttgcggatgatttctct
cgggcaatgcatgagttccttccggttgccatgcgtgacatcactaagtctgcttctgaa
gggggtcgttctgggtgggatgacgttggtggtcttgttgacattcgcaatgcaattaaa
gagatgattgaattgccttcaaaattcccaaatatctttgcaaaagctcctttaaggttg
cggtcaaatgtattattgtatgggccacctggctgtggaaaaacgcatatagttggttct
gctgctgctgcctgttcactacgatttatatcagtcaaaggacctgagctgttgaataaa
tacattggtgcttctgagcaagctgttcgggatatattctccaaagcagctgctgcagca
ccatgccttctcttttttgacgaatttgattctattgccccaaaaaggggacatgacaat
actggagtaactgatcgtgttgtcaatcagtttctgactgaattggatggtgttgaagtt
ttgactggtgtttttgtgtttgctgcaacaagtagaccagatttgcttgatgctgcactt
ctgagacctggtaggctggatcgccttctgttttgtgattttccatctccgcgtgaaagg
ttggatattctaacagtcctttcgaaaaagctaccactggatggtgatgtggatttatct
gccatagctgatatgactgagggatatagtggggctgaccttcaagcacttctctcagat
gctcagcttgcagcagtgcatgaaattctggatggtacatataccaatgatccagggaga
aagccagttatttctgatgctctcttgaagtctactgcttccaggacgagaccatctgtt
tctgaggctgagaagcaaaaattttacgacatttacagccagttcttggattcaaaaaga
tccgttgccgcacagtcaagagatgcaaaaggcaagagagcaaccctagcatga
DBGET
integrated database retrieval system
