Rosa chinensis (China rose): 112167203
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Entry
112167203 CDS
T06020
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112167203
Enzymes [BR:
rcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
112167203
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
112167203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_3
Kelch_4
Kelch_2
Kelch_6
Kelch_1
Kelch_5
MTS
DNA_methylase
Cons_hypoth95
Methyltransf_15
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
112167203
NCBI-ProteinID:
XP_024159949
LinkDB
All DBs
Position
5:1928999..1934050
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AA seq
1020 aa
AA seq
DB search
MEFEKRKAATLTSLRSEVTDKSPKGTVDTPIIPLLDVINGHRDYFTTSSCSGRISILSQP
ARRVSKKKASGGAWLYISHDPADPDSVLDLVFCSSEQNEQELQDDQNDVVFRFEPLIIAV
ECRDVAAAQVLVSKAIASGFRESGITSSNKRVIIAIRCSIRLEVPLGSSREIMVSREYLR
FLVGVANEKFEANRKRTDAFLEALQSGESGGGFAVAPAGGNYENAPSGLKGDSGCSSLSV
VPIEVSGENEENLYLWGHSACSLVKKADNGILVFGGFGGIGRHARRNQCLLVDTLSGSLR
GISIESSPSPRLGHTASLVGDCVFVIGGRADPEKILSDVWVLDIQKKEWKLTECSGDVFP
PRHRHAAAVVGSKIYVFGGLNNDAVTSSLHVLDTDNLQWREIVVSEEGPCARHSHSMVAS
GSQLYMFGGYDGEEAIGDLYRFDTEKSKCKWKKVKASGRSPHARFSHSMFVYKNHLGVIG
GCPVRQRCQELAILDLRLCMWRHVKLESNGEDLFVRSTANVFGDDLVMIGGGASCYAFGT
KFSKPMKINLLPLMLRDDNRKPLVAELHTDQIDIVKSEKSRHPQVQNVKTLTEAPDLNFK
SELPMADGIGQQVDAYWVLKLERKYAKIGKDILKKFGWLDLARKVYSVEGGLHICFPVSA
KFSDVLKENQHHMANSFEGQSDHICKPDIGKECSIDEVTCSTALDILKECGATKLVDEVV
EVRKTAKSPLKIMSDAVGSLLEDKGLPAGLLEELPTRWERLGDIVVLPVTSFKNPLWDSI
AEELWPAVAKSVNAVRLARQGRVASTGTRDSTLEILIGDNGWVDHRENGILYSFDATKCM
FSWGNLSEKRRMGSLNCRDEIIVDLFAGIGYFVLPFLVRAKAKLVYACEWNPHAVAALRR
NVQANSVSDRCIILEGDNRTTAPTGVADRVCLGLIPSSESSWATAVRALRGEGGMLHVHG
NVVDSEENSWTKHVTESVAETARSQGHCWEVSIEHLERVKWYAPHIRHVVADVRCRQTQK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagaagcgaaaagcggcgacgctgacgtcactgagatcggaggtgacggac
aagtcgccgaagggcacggtggacactccgatcattcctctcctcgacgtcatcaacggc
caccgcgactacttcaccaccagctcctgctccggccgaatctccatcctctctcagccc
gctcgccgggtctccaagaagaaagcctccggcggcgcgtggctttacatctctcacgac
ccggccgatcccgactccgtcctcgacctcgtcttctgctcctccgaacagaatgagcag
gagctccaagacgaccaaaacgacgttgttttcagattcgagccactgattatcgccgtc
gagtgcagggacgtggcggcggcgcaggttctggtgtcgaaagccatagcgtccgggttc
agagagtccggcattacgagttcgaacaagcgtgtgattatcgcgattcgctgctcgata
cgattggaggttccgctggggagtagtcgcgagattatggtgtctcgcgagtatttgagg
ttccttgtgggcgtggcgaacgagaaattcgaggccaaccggaagaggaccgatgctttt
ctggaggctctgcagagtggggagagcggaggagggtttgcggtggctcctgctggtgga
aattacgagaatgccccttccgggttgaagggagatagtggatgctctagtctgtctgtt
gttccgatagaggtttccggggagaatgaggagaatctttacctctggggtcattcggct
tgctcattggtgaagaaggcggataatgggattcttgtgtttggtggatttggaggcatt
ggaagacatgctaggagaaatcagtgtttgctggttgatacattgtctggtagtttgaga
gggattagcatagagagtagtccttcaccgagattgggccacacggcttctttggttgga
gattgtgtgtttgttattggaggcagggctgatcctgagaaaattctgagtgatgtatgg
gtcctcgatatacagaagaaggaatggaaactcaccgaatgttctggtgatgtatttcct
cccaggcatcgacatgctgcagccgtggtaggatcaaagatatatgtgtttggtggactt
aacaatgatgcagtcacttcttccttgcatgtactggatacagataatctgcagtggaga
gagatagttgtcagtgaggaaggtccgtgtgcccgacattcacactcaatggtggcatcg
ggatctcagctatatatgtttggaggatatgatggtgaggaagcaattggagacttgtac
aggtttgatactgaaaaatctaaatgtaaatggaaaaaagtgaaggcgtctgggagaagt
ccccatgcaaggttctcacactccatgtttgtgtacaaaaatcatcttggagttattggt
ggttgtccagttagacaacgttgccaagagttggcaatacttgatttacgactgtgcatg
tggaggcatgtgaaactggaatccaacggcgaagatttgtttgtacgtagcactgccaat
gtttttggtgatgatcttgttatgattggtggcggggcatcttgctatgcatttggtaca
aagttcagtaagccaatgaaaatcaacttgcttcctctgatgctgagagatgataatcgt
aaaccactcgttgcagaactgcatactgaccaaattgatattgtgaagagcgaaaagagt
agacatccacaggttcaaaatgttaaaacattaaccgaagctcctgacctaaattttaag
agtgaattacccatggctgatggcattggtcaacaagtggatgcatattgggttctgaaa
cttgaaagaaagtatgcgaaaatagggaaggacatactaaagaagtttggttggttagat
cttgcaaggaaggtttactccgtggaaggtggtttacatatttgtttccctgtgagtgca
aaattttctgatgtattgaaagaaaatcagcatcatatggcaaattcatttgaaggacag
agtgatcacatttgtaagccagatataggaaaggaatgttcgattgatgaggtcacctgt
tcaacagccttagacattctaaaggaatgtggtgcaacgaagctggtagatgaggttgtt
gaagtcagaaaaactgcaaaatctcccttgaaaataatgagtgatgccgtggggtctctg
ctggaggataaaggcctacctgcaggactgttggaggagctgccaaccagatgggagcgc
cttggagatattgttgtgcttccagtgacatcattcaagaatccgttatgggactcaatt
gctgaggagctttggcctgctgttgccaaatcagtaaatgctgttcgccttgctcgccaa
ggccgagttgcatcaactggtacaagggacagtactttggagattcttataggagataat
ggttgggttgatcatcgtgaaaatggaattctctattcttttgatgctactaagtgcatg
ttctcctggggcaacctttctgagaagcgccgcatgggctctctgaattgtagagatgag
atcattgtggatttatttgctggaattggatattttgtgctgccatttcttgtcagggcc
aaggcaaaactagtttatgcttgtgaatggaatcctcatgctgttgcggcactccggaga
aacgtacaagccaattctgtcagtgatcgatgcatcattcttgaaggagataaccggaca
acggcacctacaggagtggctgatcgggtctgccttggtctcattccatcaagtgaatct
agctgggccactgctgttagggcattaaggggtgagggtgggatgctacatgtgcatggg
aatgtggtggactcagaggagaattcatggaccaagcacgtaacagaatcagtagctgaa
actgctagatctcaaggtcattgttgggaggtttcaatagaacatttggagagagttaaa
tggtacgccccacacatccgccacgttgttgcagatgtaagatgtagacagacccagaaa
taa
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