Rosa chinensis (China rose): 112167489
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Entry
112167489 CDS
T06020
Name
(RefSeq) pleiotropic drug resistance protein 2
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112167489
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112167489
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112167489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
Rad17
AAA_29
AAA
AAA_18
AAA_33
Zeta_toxin
AAA_28
AAA_22
TsaE
AAA_30
RsgA_GTPase
nSTAND3
ABC_ATPase
NTPase_1
T2SSE
Motif
Other DBs
NCBI-GeneID:
112167489
NCBI-ProteinID:
XP_024160282
LinkDB
All DBs
Position
5:57875248..57882606
Genome browser
AA seq
1441 aa
AA seq
DB search
MAAAMAGEDLMRQSSSRRSWRSTSVREMWNAPDVFQRSGRQQAVDEEEELKWAAIERLPT
YDRMRRGMLTQVMSNGRIMHDTVDVANLGAQDKKQLMESILKVVEDDNEKFLQRLRARND
RVGIEVPKVEVRFQNLEIEGDAYVGTRALPTLLNSTLNALEALIGLVGLSPSKKRVVKIL
QDVSGIVKPSRVTLLLGPPSSGKTTLLKALAGKLDKDLRVNGSVTYCGHEFKEFVPQRTS
AYISQHDLHYGEMTVRETMDFSGRCLGVGTRYDMLVELSRREKDSGIKPDPEIDAFMKAT
SMSGQETSLITDYVLKILGLDICADIMVGDDMRRGISGGQKKRVTTGEMLVGPAKAFFMD
EISTGLDSSTTFQIVKFMRQMVHIMDVSMVISLLQPAPETYELFDDIILISEGQIVYQGP
RENVLEFFEHMGFKCPDRKGVADFLQEVTSKKDQEQYWYKKNQPYRYVSVPDFVRAFTSF
HVGQRLVEELRVPYDKRTTHPAALVKERYGISNMELFKACMSREWLLMKRNSFVYIFKTT
QITIMATIALTVFLRTEMKAGTVEDSAKFWGALFFSLINVMFNGMAELAMTGFRLPVYFK
QRDALFYPGWAFGLPIWLTRIPISLLESGIWIIFTYYTIGFAPAASRFFKQFLAFFGIHQ
MALSLFRFIAALGRSEVVSGTIGSFTLLMVFVLGGFIVAKDDIESWMIWGYYVSPMMYGQ
NAIAINEFLDKRWSAPLVNASQPTVGKLLLKQRGLYTEEYWYWICVGALFAFSLLFNVLF
IACLTFLDPLGETKTLIENDDAESNRKRRSNPEGIDMQVRNAQGGQAKRGMVLPFQPLSL
AFNHVNYYVDMPAEMKSQGIEETRLQLLRDISGAFRPGVLTALVGVSGAGKTTLMDVLAG
RKTGGYIEGSITISGYPKNQETFARVSGYCEQNDIHSPFITVYESLLYSAWLRLAKDVKT
ETRKMFVDEVMDLVELHPLRNALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS
GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVTYAGPLGRQ
SHKLVEYFEAIPGVTKIKDGYNPATWMLEVSSSAMEAQLDIDFAEVYANSDLYRRTQELI
KELSTPEPGSKDLYFPTQYSQSYLTQCKACFWKQHWSYWRNSRYNAIRFFMTICIGGLFG
VIFWSKGDQIHKQQDLINLLGATYAAVLFLGASNASAVQSVVAVERTVFYRERAAGMYSE
LPYAFAQVAIETIYVAIQTFIYSCILYSMIGYTWKVEKFFYFYYFIFMCFTYFSMYGMMV
VALTPGHQIAAIVMSFFLSFWNLFSGFLIPRPLIPIWWRWYYWGSPVAWTIYGIFGSQVG
DMTAEIDMPTGDKVAINTFVKAYLGYDYDFMIPVVIAHVGWVLLFFFVFAYGIKFLNFQR
R
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcaatggccggagaagacctgatgaggcagtcgagtagccggaggagctgg
cggtcgacgagcgtgcgggaaatgtggaacgcgccggacgtgtttcagaggagcgggagg
cagcaggcggtggatgaggaggaggagctcaagtgggccgccatagagcggttgccgact
tacgataggatgaggagggggatgttgactcaggtgatgagcaatggtaggattatgcat
gacacggttgatgtggccaatcttggggctcaggataagaagcagttgatggagagcata
ctcaaggttgttgaggacgataacgagaagttcttgcagagactcagagccagaaacgat
agggttggtattgaggttccgaaagtggaggttcgattccagaacttagagattgaggga
gatgcatatgtcggcacaagagctcttccaactctactcaactctactttgaacgcacta
gaggcattaattggattggttggactctcaccgtcgaagaaaagagttgttaagatactc
caagatgtgagcggaattgtgaaaccatcaagggttacacttcttcttggacctccttct
tcaggaaaaacaacactgctaaaagctcttgctggcaaactcgataaagatctaagggta
aatgggagtgttacctactgtggccatgaatttaaggagtttgtacctcagagaacttcc
gcttacattagtcagcatgatcttcattatggtgagatgacagttcgtgaaaccatggat
ttctccggacgttgcctgggagttggaaccaggtatgatatgctggtagagttgtctaga
agggagaaagattcaggtatcaaacctgatcctgaaatcgatgcattcatgaaagccaca
tctatgtcgggccaggaaaccagtttgatcacagattatgttctcaagatacttggacta
gatatctgtgctgatattatggtgggtgacgacatgagaaggggtatctctggagggcaa
aagaagcgtgtaactactggagaaatgttggttggaccagcaaaagcatttttcatggat
gaaatatcaacaggactggacagttccaccacctttcagattgtcaagtttatgagacag
atggttcatatcatggatgtatcaatggtcatctctctcttgcagcctgcacctgagaca
tatgagctttttgatgacattattcttatttctgagggtcaaattgtctaccaaggccca
cgtgagaatgttcttgagttttttgaacatatgggattcaaatgcccagatagaaagggt
gttgctgacttcttgcaagaagtgacctcaaagaaggatcaagaacagtactggtataag
aagaaccaaccttacagatatgtctctgtacctgatttcgtaagggctttcacctctttc
catgttggtcaacggcttgtggaggaactaagagttccttatgataaaagaactacacat
cctgctgctttggtgaaagaaaggtatggaatatccaacatggagctcttcaaggcatgt
atgtcaagggaatggctgctgatgaagcgtaactcttttgtgtacatcttcaaaactacc
cagatcacaatcatggctacaattgctttgactgtattcttaagaacggaaatgaaagct
gggacagtagaagattctgccaaattctggggagctctgtttttcagtctcattaatgtc
atgtttaacggaatggcagagcttgcaatgacaggtttcaggcttcctgtctactttaaa
caaagagatgccttgttctaccctggctgggcttttggcttgccaatttggctaaccaga
attccaatttcactgttggaatctggcatatggatcatttttacatactacaccatcgga
tttgctcccgcagccagtaggttctttaaacagttcttggctttcttcggtatacatcag
atggcactctccctcttccgtttcattgctgctcttgggagatcagaggttgtttcaggc
acaattggttcctttactttgctaatggtgtttgtcctaggaggtttcattgttgctaaa
gatgacattgaatcatggatgatatggggctactatgtttcacctatgatgtacggacag
aatgcaattgctatcaatgaatttctggacaaaagatggagtgctcctctcgtcaacgca
agtcaacccacagtaggaaagctacttctcaagcaaagaggcctctatactgaagagtat
tggtattggatttgtgttggagcgctcttcgcattttctcttctgtttaacgttcttttc
atcgcatgcttgaccttcttagatcctctcggtgaaactaaaactttgattgagaatgat
gacgctgaaagcaacaggaagcgacgatccaatcctgaaggtattgacatgcaagtgaga
aatgcacaaggaggtcaagccaaaagaggaatggtcttgcctttccagcccctttcactt
gctttcaaccatgtgaattactatgtggatatgcctgctgaaatgaaaagccaagggatt
gaagagacccgactgcaactactgagagatattagtggtgcatttaggccaggtgttttg
actgcattagttggtgttagtggtgctggaaagaccaccttgatggatgtcttggctgga
agaaagacaggggggtacattgaaggaagtattaccatctcgggttatccaaagaaccaa
gagacatttgctcgggtcagcggttactgtgagcagaatgacattcattctccatttatt
actgtttatgaatctctcttatactctgcatggctgcgtcttgctaaagatgtcaagacg
gagacacgaaagatgtttgttgatgaggttatggacttggtcgagcttcatccattaagg
aatgctttagttggacttccaggagttgatggactttcgactgagcaaaggaaaaggctt
accattgctgtggaattggttgcaaatccttctatcatcttcatggatgagccaacctca
ggtcttgatgctagagcagctgccattgttatgcgtactgtaagaaacactgtggataca
ggacgaactgttgtctgcacaattcatcaacctagcattgacatttttgaagcttttgat
gagcttttcttaatgaaaagaggaggacaagtgacttatgctggacctctaggtcgccaa
tctcacaagcttgttgaatattttgaggctataccaggggttaccaagatcaaagacggt
tataatcctgctacctggatgttagaggtcagctcttcagcaatggaagctcaacttgac
attgacttcgcagaagtatatgcgaactctgatctctataggagaactcaggaactgatc
aaggagctaagcacaccggagcctggctctaaggatctttacttccccacccaatactca
caaagctatctgactcaatgcaaggcttgcttctggaaacaacactggtcatactggaga
aactcacgatacaatgccattaggtttttcatgacgatttgcattggtggattatttggt
gttatcttctggagcaagggagaccagatccacaaacaacaggacttgattaatcttttg
ggagctacctatgctgctgttcttttccttggagctagcaatgcttctgctgtgcaatcc
gtggttgcagttgagagaacagttttctaccgtgaaagagcagcgggaatgtattcagag
ttgccttacgcatttgctcaggtggctattgagacaatttatgttgcaatccaaaccttt
atatattcctgtattctgtattccatgatcgggtacacttggaaggtggagaagtttttc
tacttctactacttcattttcatgtgctttacctacttctcaatgtatggaatgatggtg
gttgccctaactcctggccatcaaattgctgcaattgttatgtctttcttcctgagtttc
tggaacttgttctctggtttcctcatccctagaccgctcattcccatctggtggaggtgg
tactactggggttctccagttgcttggaccatctatggtatcttcggatctcaagttggg
gacatgacagctgaaatcgatatgccgactggggataaagtagcaattaacacattcgtc
aaggcttatttaggttatgactatgacttcatgatccctgttgtcattgctcatgttggt
tgggtccttctcttcttctttgtctttgcctatggcatcaagttcctcaacttccaaagg
agataa
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