Rosa chinensis (China rose): 112170068
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Entry
112170068 CDS
T06020
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112170068
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
112170068
Meiosis-specific proteins
Cohesin complex and associated proteins
112170068
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
TMF_TATA_bd
Alanine_zipper
SbcC_Walker_B
Laminin_II
Motif
Other DBs
NCBI-GeneID:
112170068
NCBI-ProteinID:
XP_024162982
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All DBs
Position
6:51266287..51276460
Genome browser
AA seq
1218 aa
AA seq
DB search
MPSLISQGKIHRLELENFKSYRGHQVIGPFSDFTAIIGPNGSGKSNLMDAISFVLGVKTG
QLRGSQLKDLIYAMDDSEKSEKGRRAFVSLVYQLANESEIQFTRAITSSGGSEYRIDGKS
VSWEAYNEKLKSLGILVKARNFLVFQGDVESIASKNPKELTGLLEQISGSDELKRDYEKY
EEEKGIAEEKAALVYQKKRTIVAERKQKKEQKEEAEKHIRLQNELKSLKREHFLWQLFNI
EKDITKTTDELEAEKRSREQVMQELDDFQQEANKKKKELAKYLKEIAQCEKKIAERSSRL
DRSKPELLKLKEEMSRINSKIKKSKTELGRKEQERGRHKEEIKKLQKGIQDLTTQLEDLQ
EKGRDSGEKLHLDDTKLREYFKVKEDAGMKTAKLKDEKEVLDRQQHADLEAQKNLEENLQ
QLRSRERELDSQNEQMLTRQRKIKENSAKHKQESKNLNNELHVMQEKHQNARQKYENLKS
KIDELEKQLRELKADRYENERDSRLSQAVETLKRLFQGVHGRMTELCRPTQKKYNLAVTV
AMGKFMDAVVVEDEQTGKECIKYLKEQRLPPQTFIPLQSVRVKQVMERLRNLGGTAKLVF
DVVQFDHALEKAILFAVGNTLVCDELDEAKRLSWSGERFKVVTVDGIMLSKSGTMTGGTS
GGMEARSKQWDDKKVEGLKKKKEQFELELEELGSIREMQLKESETAGRISGLDKKIQYAD
IEKESIKDKLANLVHERQNIKEEIDRISPDLLKLKQAVDKRSTEINKLEKRINDIVDRLY
KGFSKSVGVDNIREYEEKQLKATQSMAEERLSLSSQLSKLKYQLEYEQNRDMDTRIEELQ
SFISNLLKDLERVQKKEAEANSAAEKASDEILQLKEEAQEWKSKSEGCEKEIQEWNKRGS
TATSNVSKLNRQINSKESQIEQLTSRKQEIVENCELQQISLPIISDPMETESSTTGPVFD
FDELDESLLRNRRPSEREKVELDFKKQMDAKLSEIERTAPNLKAMDQYEALQEKERDVTG
EFEVARKEQKQKADLFNSVKQRRYELFMDAFNHISSNIDKIYKQLTKSNTHPLGGTAYLN
LENEDDPFLHGVKYTTMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYRPSPFFILDEVD
AALDNLNVAKVARFIRSKSCQGARVNQDTEGGNGFQSIVISLKDSFYDKAEALVGVFRDA
DMGCSKTLSFDLTKFREE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctgatctcccagggcaaaatccaccgcctggagctcgagaatttcaagtcc
taccggggccaccaggtcatcggccccttctccgacttcacggcgattatcggccccaat
ggctccggcaagtccaacctcatggacgccataagcttcgtccttggggtcaagaccggc
cagctccgtgggtcccagttgaaggacctgatctacgccatggacgacagtgagaagagc
gagaaaggccgcagggcgtttgtgagcttggtttaccagcttgcgaatgagtctgagatc
cagttcacaagggccatcactagctccggcggcagtgagtaccgcatagacggcaagtcg
gtatcgtgggaagcttacaatgagaagcttaagtcccttggaattctagtcaaggctcgc
aattttcttgtctttcagggtgatgtcgagtccattgcctctaaaaatcctaaggaactc
actggactgcttgagcagatctcagggtctgatgagctcaagagagactatgaaaagtat
gaagaagagaaaggcatagctgaagaaaaagcagcccttgtttatcagaaaaaaagaacc
atagtagcagagaggaagcaaaagaaagagcaaaaggaagaagctgagaagcacattcgc
ctgcaaaatgaactgaaatctttgaagagagaacactttttgtggcagttgtttaacata
gaaaaagatataacgaaaacaactgatgagcttgaagctgaaaagagaagccgcgaacag
gttatgcaagaactagatgattttcagcaagaagcaaacaaaaagaagaaagaacttgcc
aaatacttaaaagagattgctcaatgtgaaaagaagattgctgagagaagtagtagactt
gacagaagtaaaccagagctgctgaaactgaaagaggaaatgtcgcgaataaattcaaaa
atcaagaaaagtaagacagagcttggtagaaaagaacaagaacgggggagacataaggag
gaaattaaaaagctgcagaagggcatccaggatttgaccacacaactagaggatttacag
gaaaaaggccgagacagtggtgaaaaattacatttagacgatactaaattaagggaatat
tttaaagtgaaggaggatgctgggatgaaaactgcaaagctaaaagatgagaaagaggtt
ctggatcggcaacagcatgctgatcttgaagctcaaaagaatttggaagaaaatcttcaa
cagttgagaagtagggagcgtgaactggattcacagaatgagcaaatgctgacaaggcag
agaaaaattaaggaaaactctgcaaaacacaagcaggaatctaaaaatctgaataatgaa
ttgcatgtgatgcaggagaaacatcagaatgccagacaaaagtatgaaaatctgaagtca
aaaattgatgaattagaaaagcaattacgtgaactgaaggccgacagatatgaaaatgag
agagattccaggttgtctcaggcagtggagacgctcaagcgcttgtttcagggtgtccat
ggtcgcatgactgaactctgtaggccaacacaaaagaagtataatcttgctgtcactgtt
gccatggggaaatttatggatgcagtcgtagttgaagatgaacaaacaggaaaggagtgt
atcaagtatttgaaagaacaaaggcttcctccccagacattcatacctctccaatctgtt
cgtgtaaagcaagtaatggagagattgcgtaacttgggtggtactgcaaagctggttttt
gatgttgtccaatttgatcatgctttggagaaggctattctttttgcggttggcaataca
cttgtttgtgacgaacttgatgaggctaagcgcctaagctggagtggtgagaggttcaaa
gttgtaactgttgatggaattatgctgtcaaaatctggcacaatgactgggggtaccagt
ggaggaatggaagctagatcaaaacaatgggatgataaaaaagttgaaggactgaagaag
aagaaagaacagtttgagttggagctagaagagcttgggtcaattagagagatgcagcta
aaagagtctgaaacagctggcagaattagtgggcttgacaagaaaatccaatatgcagat
attgagaaggaaagcataaaggacaaacttgcaaatttggtccacgagaggcagaatata
aaagaagagattgatcgtatcagtcctgatcttctgaagctaaaacaagctgtagataag
cggagcacagaaatcaataagcttgagaagaggataaatgatattgttgacagactctac
aaaggctttagtaaatctgttggggtagataacattcgcgagtatgaagaaaaacaactc
aaggctacccaatctatggctgaagagaggcttagtttgagtagccagctatcaaaactg
aaataccagctagagtatgagcaaaatcgggacatggatacacgaattgaagaactccaa
tcatttattagtaacctactaaaagatttagaacgggttcaaaagaaagaggccgaagcc
aactctgcagcagaaaaagcctctgatgagattcttcagttgaaggaagaagcacaagaa
tggaagtccaagtcggaagggtgtgaaaaggaaattcaagaatggaacaagcggggttct
actgcaacatcaaatgtatccaaacttaatcgacagataaattctaaggaatcgcagatt
gagcagctaacatctcgaaagcaggagatagtagaaaattgtgaactacagcaaataagc
cttccgatcatttcagatccaatggagactgaatcctccacgacaggcccagtatttgat
tttgatgagttagatgagtctctattgaggaataggaggccttctgagcgggagaaagtt
gagttagactttaagaaacaaatggatgccaagttatcagaaattgaaagaacagctccc
aatttgaaggccatggaccaatatgaggctctacaagaaaaggaaagagatgtaactgga
gagtttgaagtggccagaaaagaacagaagcaaaaggctgatctgtttaactcggttaag
caaaggaggtatgagttgtttatggatgccttcaaccatatttccagtaatattgataag
atatacaaacaactgacgaagagcaatacacatcccctgggtgggacggcatatttgaat
ttagaaaatgaagatgatccctttttacatggcgtcaagtacactaccatgcccccaaca
aagcgctttcgagatatggaacaattatctggcggagagaaaactgttgcagcgttagca
ttactgttttccatacacagctataggccttcgccttttttcatactggatgaagttgat
gctgcactggataacttaaatgtagcaaaggttgctcgattcatccgttcaaagtcatgc
caaggagccagggttaatcaggatactgaaggaggcaatggttttcaaagtattgtaata
tctctaaaagatagcttctatgacaaggctgaagctctggttggggttttcagggacgct
gacatgggttgttccaaaacactgtcatttgacttgactaaatttcgggaggagtaa
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