Rosa chinensis (China rose): 112171842
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Entry
112171842 CDS
T06020
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112171842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112171842
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112171842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
RuvB_N
AAA_lid_3
AAA_22
AAA_16
AAA_5
RNA_helicase
AAA_14
AAA_2
AAA_18
nSTAND3
TIP49
IstB_IS21
Rad17
AAA_33
AAA_28
Bac_DnaA
AAA_17
Mg_chelatase
Zeta_toxin
AAA_19
NACHT
ATPase_2
AAA_3
NB-ARC
Parvo_NS1
Viral_helicase1
TsaE
ABC_tran
AAA_25
Sigma54_activ_2
AAA_24
Sigma54_activat
DUF815
AAA_7
NTPase_1
AAA_11
KTI12
DnaB_C
Motif
Other DBs
NCBI-GeneID:
112171842
NCBI-ProteinID:
XP_024164725
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All DBs
Position
6:complement(68988818..68992738)
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AA seq
530 aa
AA seq
DB search
MPMPGILLSGPPGCGKTKLAHAIANETSSTFHKISAPSLVSSFTGGSEDMIRRLFHKAYQ
TAPSVVFIDEIDVIASKREDLKAAEQRIVAQLLTCMDKVNSKSGRVIVIGATNRPDAIDP
ALRRPGRFDLEFVLAAPDEKARCHILSLLLKHPRLEGSFDLHKLARATSGFVGADLETLV
IKAVKIAENRIVNNKKADRSIYAPEEMKNYSICMTDFEEAVQAIQPSLKREGFNAIPDVK
LEDVGGQDSLKQEFLEFIVRPIKYPAFYEGEDLETGVLLYGPPGCGKTLIAKAVANEAGA
SFIHIKGPELLNKYVGESELQLRTIFSRARMCSPCILFFDEVDSITTKESEGSWVVQRLL
KQFLIEFDGGEKRQGVFIIGATNRPDQMDPAILRSGRFGKQILVSLPDKDERGSILKALA
RKKHIDPSVDLCEIAQGCENFSGADLAMLMSRASKLSKAETFEEFIATGGSSDAPPPSII
NNIHFEQARATITPLSIEKIRWYQNFGEEEQKTPRERCVQGFMDFAAPRS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgcctggaatattgctgtccggaccacccggctgtggcaagactaaattggct
catgctattgccaatgaaactagctctaccttccacaagatttcagcaccctcactcgtc
tccagctttacaggtggatctgaagacatgataagaaggctgtttcataaagcttatcag
actgctccgtcagttgtgtttattgatgagattgatgtgattgcttccaaaagagaggat
ttaaaagcagcggagcagaggattgtggcacaacttcttacctgcatggacaaagtgaat
tcaaaatctggccgtgttattgtgattggagctaccaacaggccggatgctattgaccct
gctctaaggaggccagggcgttttgaccttgagtttgtcttagccgctccggatgaaaag
gccaggtgccacattctttctctgcttctaaaacatccaagacttgaaggttcgtttgat
cttcataaactagccagggctacatctgggtttgttggagctgatttggaaacactggtc
atcaaggctgtcaagattgccgagaataggattgtaaacaacaagaaggctgataggtct
atatatgcacctgaagaaatgaaaaactactccatctgtatgactgattttgaggaagca
gttcaggctattcagccttctttaaaaagagaaggattcaatgcaattcctgatgtgaaa
ttggaggatgttggtgggcaggattcattaaagcaggaatttcttgaatttattgttagg
cctattaaataccctgcattctatgagggagaagacttagagacaggtgttttgctctac
ggacctccaggatgtggtaaaacactgatagcaaaggccgttgctaatgaggctggtgct
agtttcattcacattaagggccctgaacttttgaataaatatgttggagaaagtgagctg
caacttcggacaatatttagccgtgcaaggatgtgttcgccatgtatacttttctttgat
gaggtggactctataacaactaaggagagcgaagggtcatgggttgttcagcggctattg
aagcagtttcttatagagtttgatggtggagagaagcggcaaggtgtatttataattggt
gccactaatagacccgatcaaatggaccctgctattttacggtccggaaggtttggtaaa
caaatacttgtctccctgcccgataaagacgagcgtggttcaatcttgaaagctcttgca
aggaaaaaacatatagatcccagcgtagatctgtgtgagattgcacaaggatgtgaaaac
ttcagtggagctgatcttgctatgctgatgagtagagcttctaagctttctaaagctgag
acatttgaggaatttatagcaactggtgggagttcagatgcaccaccaccatcgattatc
aacaatattcactttgagcaagcacgagctacaatcacaccattatccatcgagaaaatt
cgttggtatcagaattttggagaggaagaacaaaagactccccgtgaacgctgtgttcaa
ggattcatggactttgcggcaccgagaagttga
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