Rosa chinensis (China rose): 112177256
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Entry
112177256 CDS
T06020
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X3
KO
K08740
DNA mismatch repair protein MSH4
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112177256
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Meiosis-specific proteins
Others
112177256
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_23
AAA_29
AAA_27
Motif
Other DBs
NCBI-GeneID:
112177256
NCBI-ProteinID:
XP_024171318
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All DBs
Position
7:21374252..21383718
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AA seq
795 aa
AA seq
DB search
MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYDPM
VIIVSPNKLAPDGMVGVSELADRFYATVKKVVMARGCFDDTTGAVLIKNLAAKEPSALGL
DTYYKQYYLCLAAAAATIKWMCRIEAEKGVIVTNHSLSVTFNGSFAHLNIDATSVQNLEI
IDPLHSTLWGPSNKKRSLLHMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMS
NEQLFFGLSQVLRKFPKESDRVLCHFCFKPKKITNKVMGVDNARKSQLLVSSIILLKTAL
DALPLLSRALKDAKSSLLANVYKSVCENEKYAAIRKRIGEVIDEDVLHARVPFVARTQQC
FAVKAGIDGLLDIARRSFCDTSEAIHNLANKYREDFKFPNLKLTFNNRQGFYFSIPHKSI
EGKLPSQFIPVLKHGNNIHCSTLELASLNVRNKSAAAECFLRTEVCLEELVDAIREDVSA
LTLLAEALCLLDMIVNSFAHTISNKPADHYTRPEFTDDGPMAIEAGRHPILESIHNDFVP
NNIFLSEASNMVLIVGPNMSGKSTYLQQVCLIVILAQIGCYVPARFSTLRVVDRIFTRMG
TVDNLESNSSTFMTEMKETAFIMQNVSLRSLVVMDELGRATSSSDGFAIAWSCCEHLLSL
KAYTIFATHMENLSELVTVYPNVKILHFNVDIKNNRLDFKFQLKEGPRHVPHYGLLLAEV
AGLPSSVTETARNITSRITEKEVKRMEVNCLRYHPIQMAYHVAQRLICLKYSSQDEDSIR
EALHNLKESYIHGRL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggaggagagagatcgagcttcgtcatcggtctcatcgagaacagagcc
aaggaggttggagtggcagcatttgatttaaggtcggcttctctacatctatctcaatat
attgagactagtagttcatatcagaatacaaaaactttgctgcaattctacgatcctatg
gtgattattgtttcccccaacaaactggcacctgatgggatggttggagtttcagaattg
gcagatagattttatgccacagtcaagaaggttgtaatggctcgtggttgctttgatgac
actacgggtgctgtgttgattaaaaatctagcagccaaggaaccttcagcactaggattg
gatacttattacaagcagtactatctctgcttggccgctgcagcagctacaattaagtgg
atgtgcaggatagaagcagagaaaggggtcattgttacaaaccactcattgtcggtcact
tttaatggatcatttgcccatttgaatatcgatgctactagtgttcaaaatttggaaatc
attgacccgcttcattctacactgtggggtccaagcaataagaagagaagtttgttgcat
atgctgaagacgacaaaaactataggagggtctaggcttcttcgtgccaatctattgcag
cctttaaaagatattgagactataaatgctcgtctagattgcctggatgagctaatgagc
aacgaacagctattctttggactctctcaggttctgcgcaaattcccaaaagagagtgat
agagtactttgtcacttctgcttcaagccaaagaaaattacaaataaagttatgggtgtt
gataatgctagaaaaagccagctgttggtatcaagcattattctcctcaaaactgctcta
gacgctttgcctttactctcaagggctctcaaagatgcaaaaagttctcttcttgctaat
gtttacaagtctgtatgtgaaaatgagaaatatgctgctattaggaaaaggattggagag
gtgattgatgaagatgtgcttcatgcaagggtaccttttgtagcccgcacccagcagtgt
tttgctgtaaaggccggaattgatggacttttggatattgcacggagatcattttgtgat
actagtgaagctatacataatcttgctaacaagtaccgcgaagatttcaagttccccaat
ttgaaactcacatttaacaataggcaaggtttttacttcagcattccacataagagcatt
gaggggaagcttcctagccagttcattccggtgttgaaacacgggaacaatatacattgc
tcaactttggagcttgcttctctaaacgttagaaataagtctgcagctgcagaatgcttc
ctacggactgaagtttgcctggaagaattagtagacgccatacgagaggatgtttctgca
ctcacattacttgcagaggccttgtgccttctagatatgattgttaactcatttgcacat
accatttccaataagcctgctgatcattatactagaccagaatttacagatgatggccca
atggcaattgaagctggaagacaccctatccttgagagcatacacaatgattttgttccc
aacaacatctttttatcggaggcatcaaacatggtgctgattgtgggcccaaacatgagt
ggaaagagcacttatcttcagcaagtatgtcttatagttattcttgctcagatcggttgt
tatgttcctgctcgcttctcaactttgagggttgttgatcggatatttacaaggatgggt
acagtggacaatcttgaatccaactctagtacgttcatgacagaaatgaaagaaacagct
ttcatcatgcaaaatgtttccctaaggagtctggtcgtcatggatgaacttgggagggct
acatcttcctctgatggatttgcaattgcatggagctgctgcgaacatttgttatcactg
aaagcgtatactatatttgctactcatatggagaacctctctgaattagtaactgtctat
ccaaatgtgaaaatacttcacttcaatgttgacattaaaaataaccgtctagatttcaag
tttcaactcaaggaaggaccaagacatgttccacattatgggcttctattagcagaagtg
gcaggattaccaagctcggtgactgagacagccagaaacatcacatccaggatcacagaa
aaggaagtgaagaggatggaagtaaactgcctgcgatatcatccaatccagatggcttac
catgttgctcagcgtctcatatgtttgaaatattccagccaggatgaggattcaatcaga
gaagcactgcataacctgaaagagagctacattcatggcaggctgtga
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