Rosa chinensis (China rose): 112178790
Help
Entry
112178790 CDS
T06020
Name
(RefSeq) beta-xylosidase/alpha-L-arabinofuranosidase 2
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00520
Amino sugar and nucleotide sugar metabolism
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
112178790
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
112178790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
112178790
NCBI-ProteinID:
XP_024172777
LinkDB
All DBs
Position
7:complement(48427291..48431618)
Genome browser
AA seq
778 aa
AA seq
DB search
MASFFFFSSVQNRVLQNRAVPKALLCFTLCYILMLSFCMSSVSGQSFACGGGSSSFPFCD
KSLAADARVADLVKRLTLQEKITFLVNSAGSVSRLGIPKYEWWSEALHGVSYVGPGTKFS
NVVPGATSFPQPILTAASFNNSLYEAIGRVVSTEARAMYNVGLAGLTFWSPNINIFRDPR
WGRGQETPGEDPLLTSNYGSGYVRGLQQTDSGDKNRLKVAACCKHYTAYDLDNWKGTDRY
HFNAVVTKQDMDDTFQPPFKSCVLDGNVASVMCSYNQVNGIPTCADPNLLSGVIRGEWKL
NGYIVTDCDSIDVYYKNQHYTKTPEEAAAKAILAGLDLNCGSFLGQYTEGAVKGGLVTEA
AIDKAITNNFGTLMRLGFFDGDPSKQPYGHLGPKDVCTPQNQELARETARQGIVLLKNTP
GSLPLSPTAIKSLAVIGPNGNVTKTMIGNYEGTPCKYTTPLQGLTAVVPTTFVAGCADVA
CGTAQVDDATKLAAAADATVLIVGENQSIETESHDRIDLHLPGQQTLLITEVAKASKGPV
ILVIMSGGGFDITFAKNDAKITSILWVGYPGEAGGAAIADVIFGFYNPSGRLPMTWYPQA
YVDKVPMTNMNMRPDPASGYPGRTYRFYTGDTVYEFGYGISYSTFNHRLVRAPKQVSIPL
EEDHVCHSSSCQSLDVVEERCQNLDFDIHLGVKNMGKMSGSHTVLLYSSPPSVHNSPKKH
LLGFEKVFLSSQGEALVKFNVDVCKHLSVVDELGSRKVALGDHVLHVGDLKQTLSVRI
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttttttttcttttcctctgttcagaacagagtacttcaaaacagagcagtg
ccgaaggccttgctctgttttactctctgttacatactgatgttatctttctgtatgagc
tcagtttccggccagtcatttgcctgcggtggaggttccagcagcttcccgttctgcgac
aagtcgttggcggccgatgcgagggtggcggacctcgtgaagaggctgacattgcaggag
aagattacgtttctggtgaacagtgcaggcagtgtgagcaggcttggaattcccaagtac
gagtggtggtcggaggctttacacggtgtgtcgtacgtcggccccgggaccaagttttcg
aatgtcgtccccggagctaccagcttccctcagcccattttgaccgcagcgtcgttcaac
aactctctctacgaagccatcggaagggtggtgtcaactgaggccagagcaatgtacaat
gtgggattggcaggattgacattctggtccccaaacattaacattttccgagacccgaga
tggggaagaggccaagagactccgggagaagacccattgctcacgagtaactacggatca
ggatacgttagaggtcttcaacaaaccgatagcggagacaaaaataggcttaaagttgca
gcatgttgtaaacattatacagcctatgatttggacaattggaaaggaactgacagatac
catttcaatgcagtggtaacaaaacaagacatggatgatacatttcagccaccattcaaa
agttgtgttcttgatgggaatgttgctagtgtcatgtgttcttacaaccaggttaatgga
atacctacctgcgcagacccaaaccttctttctggggttatccgaggcgaatggaagttg
aatggatacatagtgactgattgtgattcaatagatgtgtactacaagaaccaacactac
accaagacaccagaagaggctgcagctaaggctatattagcaggtttggatctaaactgt
ggatcattcttaggacagtacacagaaggagcagtgaaaggaggacttgtgactgaggca
gccattgacaaggccatcacaaacaattttggcacattgatgcgtctaggcttcttcgat
ggtgatccaagcaagcaaccatatggacatcttggtccaaaggatgtgtgcactccacag
aaccaggagctggcacgtgaaacagcgagacaagggatagtgttgctcaagaacactcca
ggatcactgcctctgtctcccacagccatcaaatccttggcagttataggtcccaatggc
aatgtcacaaagactatgattggaaactacgaaggcaccccttgcaaatatacaactcct
ttgcaaggcctaacagccgtagttcccacaacatttgtggccgggtgcgctgatgtggct
tgtggcactgcccaggtagatgatgctaccaagttagcagccgcagcagatgcaactgta
cttatagtgggtgaaaatcaatcaattgagactgaaagtcatgatagaatcgacctccat
cttccaggacagcaaactctcctaataactgaagtagcgaaggcttctaaaggacctgtt
atccttgtcataatgtctggaggagggttcgatattacctttgcgaaaaatgatgctaaa
attacaagcattctatgggttggttaccctggcgaagctggtggagctgccattgctgac
gtgatttttggcttttataatccaagtggaagactacctatgacgtggtatcctcaagca
tatgtagacaaggtccctatgacaaacatgaatatgagaccagatcctgcgagtggttac
ccgggcaggacttaccggttttacactggtgacacggtttatgaatttggatacggaata
agctactccaccttcaatcaccgcctagttcgagcaccgaagcaagtttccattccctta
gaggaggatcatgtatgccactcatcaagttgccaatcacttgatgttgtagaagaaagg
tgtcaaaatctagatttcgatatccatttgggggtgaaaaacatgggcaaaatgagtgga
agtcatacagtcttattgtattcgagtcctccatctgtgcacaattctcctaaaaagcac
ttgttgggatttgagaaggtgttccttagctctcagggagaagcattggtcaagttcaat
gtggatgtttgcaagcacttgagtgtggttgatgagctaggaagtaggaaagttgctttg
ggagatcatgtactacatgtgggagacttgaaacagacattgagtgtgaggatttga
DBGET
integrated database retrieval system
