Rosa chinensis (China rose): 112182181
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Entry
112182181 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase ATG1a-like
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112182181
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rcn01001
]
112182181
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112182181
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112182181
Enzymes [BR:
rcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112182181
Protein kinases [BR:
rcn01001
]
Serine/threonine kinases: Other
ULK family [OT]
112182181
Membrane trafficking [BR:
rcn04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
112182181
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112182181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kdo
APH
ATG1-like_MIT2
RIO1
Kinase-like
YrbL-PhoP_reg
Motif
Other DBs
NCBI-GeneID:
112182181
NCBI-ProteinID:
XP_024176400
LinkDB
All DBs
Position
1:complement(53312752..53318041)
Genome browser
AA seq
677 aa
AA seq
DB search
MDSLGGPSNTNKSRLIGDYILGPKVGSGSFAVVWRSTHRQLGIEVAVKEIDKKHLSPKVS
ESLLKEISILSTINHPNIIHLFEAIQTKERIYLVLEYCDGGDLAAYIQRHGKVSETVARH
FMRQLAAGLQVLQEKHLIHRDLKPQNLLLSANEETPLLKIGDFGFARSVTPQDLADTLCG
SPLYMAPEIILNQKYDAKADLWSVGAILYQLVTGKLPFDGNSQLQLFHNVLTSTELRFPQ
GALEELHPDCVDLCRSLLRLNPVERLSFQEFFNHKFLREVRVMVEVEHTPPLKSTGEQPS
SSGSNTMLQLHARHPINSSIGNLSLDSAAHIKGLVPDFSCDKPRKSVNQDPNLQDQLRVS
DSMESIEKDYVMVNSHFASMESFSYYLEHSLQLDSTTRASICASKQKDHGIPRVIKTEEL
AAGSLGGGSSQTQGSVIEPASCASTLLLEVQGLSILHPSTRLHLLHQHAQVLADLSQEKY
NAGLYLESFSVELVVLAIWKKALQICSSWLASIEKDEPESSSANASSVVQGGLSLNNSEN
VDFTRPSSVSVWAEQGFLVAFDRAEKLSYHVQDMDGAAEVPDAMEIIFQKALDVGTKAAV
DEYMENKGSAAALYTKAMLLLSFIAGEATSLPXSPPFYLAPANKKRVQQYMVNLESHRIK
FLKPDPTPVQVKDSITK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggatagtctcggcggcccatcgaacaccaacaagtcccggttgatcggagactacata
ctgggcccgaaagtcgggtcgggctcgttcgccgtcgtgtggcgctcgacccatcgccaa
ctgggtattgaagttgcggtgaaggagattgacaagaaacacttgagcccaaaagtcagc
gagagtttacttaaggaaatttcgattcttagcaccataaaccatcccaatattattcac
ctttttgaggccatccagaccaaggaaagaatttaccttgtgctggagtactgtgatggt
ggtgacttggcggcttatatacagcgccatgggaaagtttcggaaactgtggccaggcac
ttcatgaggcaattggctgcaggattgcaagtgcttcaggaaaagcacctcatccaccgg
gatttaaaaccacagaacttgctcttgtcagccaatgaggaaaccccactattgaagata
ggggactttggttttgcaagatctgtcacaccccaagacttggctgacacactttgtggt
tcaccattatacatggctccagagattattctgaatcaaaaatatgatgcaaaggctgat
ttatggagtgttggagcaattttatatcagctggtgactgggaagctaccgtttgatggg
aatagtcaattacagctttttcataatgttctgacatctactgagctgcggtttccacaa
ggtgctttggaagaattgcatccagattgtgtagatctctgcagaagccttttgcgtcta
aatccagttgagcgactgtcgtttcaggagttcttcaatcacaagtttctcagagaagtg
agggtgatggtggaagttgaacacactccaccacttaaatcaacgggtgaacagcctagt
tcttctggctccaatacgatgttgcaattgcatgccaggcatcccatcaactcctctatt
ggaaatctgagtttagattcagctgcacatattaaaggtcttgtgccagatttttcatgt
gataagccgaggaaatctgttaatcaagatccaaacttacaggatcagctccgagtttcg
gattcaatggagtccattgaaaaagattacgtaatggttaattctcattttgcatcgatg
gagagtttctcatattaccttgaacactccctgcaacttgattccacaactagagcttct
atctgtgcttcaaagcagaaagatcatggtataccacgtgtcatcaaaacagaggagctg
gcagctggttctcttggtgggggaagttcacaaactcaaggatcagttatagaaccagca
tcttgtgcatcgactctgttactggaagtgcaaggactgtctatattgcatccttcgacc
aggctccatctgttacatcagcatgctcaggtccttgctgatctttctcaggaaaagtac
aatgcaggactgtatctagagtcattttcagttgaactagttgttttggccatatggaag
aaagctcttcaaatttgcagcagttggctggcatcaattgaaaaggatgaacccgaaagc
agttcagcaaatgcatcctcagttgttcagggtggcttgtcgctaaacaattcagaaaat
gtagactttactaggccgtcatctgtttcagtttgggccgagcaaggtttcctagttgca
tttgatcgcgcagagaagttatcctatcatgtccaagatatggatggtgctgctgaagta
ccagatgcgatggaaattatattccaaaaagctctagacgttgggacaaaagccgctgtt
gacgagtatatggagaacaagggtagtgcagcagcattgtacaccaaagctatgcttctg
ctctcttttattgcaggagaagcaacctctctgcccntaagccctccattttacttggct
ccggctaataagaagcgagtccaacaatacatggtaaacttggagtcccatcggatcaag
tttctcaaaccagatcccactcctgttcaagttaaagactccattactaagtaa
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