Rosa chinensis (China rose): 112182367
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Entry
112182367 CDS
T06020
Name
(RefSeq) probable lysine-specific demethylase ELF6 isoform X1
Organism
rcn
Rosa chinensis (China rose)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
JmjN
zf-H2C2_2
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
112182367
NCBI-ProteinID:
XP_024176619
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Position
1:complement(54516027..54524280)
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AA seq
1612 aa
AA seq
DB search
MGDVKIPNWLKGLPLAPEFHPTHTEFADPIAYISKIEKEASEFGICKIIPPLPKPSKRYV
FSNLNKSLAKRPELGSDLIPGNDGDAVKVGSGDGSNDGEVRAVFTTRHQELGQTVKRAKG
AGVQDPPPSGVDKQVWQSGEVYTLEQFESKSRAFARSILGTIRDVSPLVIEAMFWKAASE
KPIYIEYANDVPGSAFEEPEGLLCYSRRRRRKRNSYHRSGPNSDSKKSEMISSCERKSQN
GEVEDASPKNVSLTSVEVPKSSALPGIVSTDETSQSSRKKSQNSSCDVEGTAGWKLSNSP
WNLQVIARSPGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNFLHNGSAKT
WYSVPGDYAFAFEELIRTEAYGGTADRLAALSLLGNKTTLMSPEVVIASGIPCCRLIQNP
GEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLKVAKEAAVRRAAMNYLPMLSHQQLLYL
STMSFVSRVPKSLLPGVRSSRMRDRQKEDRELSVKKAFIEDILNENDVLSALLGKESSCR
AVLWNPDLLPNASKESSIPTASAPVDTNSKENATDTQGGNSTNDQNFLVDEMSLYMENLN
DLYLGSDDLSDDFQVDSGTLACVACGILGFPFMSVVQPSEKASMELQPECILAEELPGVS
GNSHISPEHSKSFKGCATEDLSPISNAFPHARDPVLPCTARFNNCWNTVDKFLRPRSFCL
EHAVETLELLQCKGGANMLVICHSDYQKIKAPAAAIAEEIGCPFNYNEVPLDIASNEDLN
LIDLAVDDGRDECGEDWTSKLGINLRHCVKVRKSSSSKRVQHALALGEVFSKQSRSSEFL
AVNWKSRRSRTKKVYLDAPYKQCDSIDKKKEEVVEAKSADATSFKREAKIIQYSRRNKRK
PSTSTGAGRFVEHPGTSEELDKHSRRASDNSIYNNGKSTSICARLDSFTSDSTEMHPDVQ
MLEATRDICLDSTLSQVADTVALTAGSADAQIENRSLEERNMNGGGCNLAASESDMQDEI
KILKEARQNNSIIPLVIARDERSEKHRGEQENEKLNKNDDNCNLVSEGQSQLWSQEDVLM
NVVSVFTKSTNLSAADSIVTSSEEQIVNAVIEKSCVNSEVCESMTLGDEVQQEIQTTNRS
NDKAPVSCSSTLLNDPTFAAAECHVEFDRETHIVEEFSNVVSSEFKPEEDIEIPKGRYEK
PSLSPTRRVGQHSPASTDRLSGVAKAFCAAADFQPGPTSHGEEFQAADRTSEGEYISTSM
IKMEETHPSSLEESSEVPRGSSLEEGTSSGVTSATLVQQDAQTTNAAVEAPSHNFVVRGE
NQPIPVSVEDEVPRVSCAIDVTLDDKERWTNSYSNKELIASHDTSKCEPSRVTIKTYFRV
KRGSRAARELHNGTEVCISQHDRELGNIEPSILDPRPSPEIGSKRKRGVGQKMDDNSNFN
GYIRGPCEGLRPRAAKDATVSRIDIHNQVEEQPVAKKVKRPSDVPVPPKDKKKEQVRKPH
SCNLGGCSMSFQTKEELMVHKRNRCPHEGCGKKFSCHKYAMVHSRVHDSARPFKCPWKGC
SMSFKWAWAQTEHIRVHTGEKPYKCKVDGCGLSFRFVSDFSRHRRKTGHYVS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgttaagataccaaattggcttaaagggttgccattggcgcccgagtttcat
ccaacccataccgaatttgctgacccaattgcttatatatcgaaaattgagaaggaagcc
agtgaatttggtatttgcaagattatcccaccattgccgaaaccttccaagagatatgtt
tttagtaacttgaataagtcacttgctaagcggcccgaattgggttctgatttgatccct
gggaatgatggtgatgctgtgaaagtgggttctggggatggtagtaatgatggggaggtt
agggcagtgtttaccactaggcaccaagaattggggcagactgtgaaaagagcgaaaggg
gcgggtgttcaggatccgccgccatcgggtgttgataagcaagtgtggcaaagtggggaa
gtttatactttagagcagtttgagtccaagtccagagctttcgcaaggagcattttaggt
acaattagagatgtttctccattggttatagaggcaatgttttggaaggcagcttctgag
aagccgatatatattgagtatgccaatgatgtgcctgggtctgcttttgaagaaccggag
ggtctgttgtgctattcacgtaggcggaggaggaagaggaattcctaccacagaagtgga
ccaaactctgatagcaagaaaagtgaaatgattagcagttgtgaaagaaagtcccaaaat
ggtgaagttgaggatgcttcccctaaaaatgtttcacttacatccgtggaggtacccaaa
tcatctgctttgccaggaatagtgtcaacagatgaaacttctcaatcttctaggaaaaaa
agtcaaaattcttcttgtgacgtggaaggtactgctggttggaagctttcaaacagtcca
tggaacttacaagtcattgcacgctcacctggttcacttactcgtttcatgccggatgat
atcccaggtgttacttctcctatggtttacatcggcatgttgttcagctggtttgcttgg
catgttgaagatcatgagcttcacagcatgaattttctgcacaatggatctgcaaagact
tggtattctgttcctggagattatgcatttgcttttgaggaacttattcgcactgaggcg
tatggtggtactgctgaccgtctggctgctctctcactattgggtaataaaacaacttta
atgtcacctgaggtagttatcgcatcgggaattccttgttgcaggttaatacagaatcct
ggtgaatttgttgtgacttttccaagggcttaccatgtaggattcagtcacggtttcaat
tgtggagaagctgctaactttggaacaccacaatggcttaaagtggctaaagaagctgca
gtacgtagagctgctatgaattatcttcctatgctctcccatcaacagctgctatacctc
tcgactatgtcttttgtttcaagagtgccgaagtccctactaccaggtgtgcggagttcc
cgtatgagagataggcaaaaggaagacagagagctatcagtaaagaaggcttttattgaa
gatattttaaatgagaacgatgtgttatctgctcttcttgggaaagaatcaagttgccgt
gcagtattatggaatcctgatttacttccaaatgcaagtaaagagtcttccatacccact
gcaagtgctcctgttgatacgaattcaaaagaaaatgctacggatactcagggtggaaat
agtactaatgatcagaactttctggtagatgaaatgagtttgtacatggaaaatcttaac
gacttatatttgggcagtgatgatttgtctgatgacttccaagttgactcaggaacattg
gcatgcgtggcatgtgggatacttgggtttccatttatgtctgtggtgcaaccatctgag
aaggcgtcaatggaacttcagcctgaatgtattttggctgaagaattgcctggagtttca
ggcaattctcatatctctccagagcatagcaaatctttcaaaggctgtgctacagaggat
ctctctcctatttccaatgcttttccacatgcaagggatcccgtcttaccttgcacagca
aggtttaacaactgttggaatactgttgataaatttctgagaccacggagtttctgtctt
gaacatgctgttgaaactttggagctgttgcagtgtaaaggtggagcaaacatgcttgtg
atttgccattctgactatcagaaaataaaggctcctgctgcagccattgcagaagaaatt
ggttgcccttttaactataacgaggttccattggacattgcctcaaatgaagatttgaac
ttgatagatcttgctgtcgatgatggacgtgatgaatgtggagaagattggacctcaaag
ttgggtatcaacctacggcactgtgtcaaggtcagaaaaagttcttcctcgaagcgagtc
cagcatgcattggcattgggtgaagtgttctcgaaacaaagtcgcagctcagaatttctg
gccgttaactggaaatctagaagatctcggacgaagaaggtttatctagatgccccttac
aaacaatgtgacagcattgacaaaaagaaggaagaagtggtggaggcaaagtcagcagat
gccacctcttttaaaagggaagcaaaaataattcaatattcaagaaggaataagcgaaaa
ccaagtacttctacgggagcaggtaggtttgttgagcaccccggtacttctgaagagctt
gataaacatagcaggagggcatcagataatagcatttacaacaatgggaagtccaccagc
atatgtgcaaggttggactcatttacatcagatagtactgaaatgcatcctgatgtccag
atgcttgaagccaccagggatatctgtttggactctactctttcacaagttgcagataca
gttgccttaacagctggaagtgctgatgcacagattgaaaatcgcagtttggaagagagg
aacatgaatggtggaggttgtaatctagcagcaagcgagtctgatatgcaagatgagatc
aagatccttaaagaagccaggcaaaacaactcaatcattccacttgtcattgcacgtgat
gaaaggtctgaaaagcatagaggggaacaggaaaacgaaaaattgaacaaaaatgatgac
aattgtaatctggtgtctgaagggcagtcccaactttggtctcaggaggatgttcttatg
aatgtggtttctgttttcaccaaatcaacaaacttatctgctgctgactcaattgtgaca
agttctgaggaacagatagtcaatgcagtcattgagaaatcttgcgtgaatagtgaagtt
tgtgaatctatgactttgggtgatgaagtgcagcaagaaatccaaactactaacagaagt
aacgacaaggcaccggtttcatgtagttccacgctgttgaatgatccaacctttgctgca
gctgaatgtcatgttgaatttgacagagagactcatattgtagaagaatttagcaatgtt
gtttcttcagaattcaaaccagaagaagatattgagattccaaaaggaagatatgagaaa
cccagtttaagtcctaccagacgagtcggtcaacactctcctgcttctacagacagattg
tctggagttgcaaaggcgttctgtgctgcagcagattttcagccaggcccaacttcacat
ggtgaagaatttcaggcagcagatagaactagtgagggggaatacatctctacttcaatg
ataaagatggaagaaactcatccctcgtcattggaagaatcttctgaagttccaagagga
agctctttggaggaaggcacgagcagtggcgtgacttcagccactctagttcagcaagat
gcccaaactacaaatgcagctgtggaagcgcccagtcataattttgttgttcgaggagaa
aatcagcctatacctgtctcggttgaagatgaagttcccagagtgagctgtgcaatagat
gtgaccttggatgataaagaacggtggacaaactcgtacagtaataaggaactcattgct
agtcatgatacttcaaaatgcgagccgtctcgtgttacaattaaaacatactttagagtt
aaaagagggagccgtgctgctcgagaattgcacaacggtactgaagtttgtatatcacaa
catgatagagagctgggaaacattgagccttccattttagaccccagaccaagtcctgaa
attggaagtaaaagaaagagaggagtggggcagaaaatggatgacaactccaacttcaat
ggatatattagggggccatgtgaaggtctgcgaccaagggctgcgaaggatgcaacagtt
agtaggatagacatccacaaccaggtcgaagagcagccagtggcaaagaaggtgaagaga
ccttcagatgttcctgttcctcccaaggataagaagaaagagcaagtaaggaagccccac
agctgcaacctagggggctgtagcatgagttttcagacaaaggaggagttaatggtgcac
aagcgtaaccgctgcccacatgaagggtgtggtaagaagttcagttgccacaagtatgca
atggttcacagccgtgtgcatgatagtgctaggcccttcaagtgcccatggaagggttgc
tccatgtcattcaagtgggcatgggcccagactgagcatatacgagtgcacactggagaa
aaaccatacaagtgcaaggtggacggctgtggcctctctttcaggtttgtatcagatttt
agccgtcacagacggaaaacagggcattatgtgagctaa
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integrated database retrieval system
