Rosa chinensis (China rose): 112192370
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Entry
112192370 CDS
T06020
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
rcn
Rosa chinensis (China rose)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
UBA_4
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
112192370
NCBI-ProteinID:
XP_024187825
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All DBs
Position
3:complement(40979902..40991307)
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AA seq
1403 aa
AA seq
DB search
MMFLMTALDSTDLFLTALTAFSHPPRPIPRPLELSLPPIPSTFPHSKLIPRTRFALDAFR
YAGDYSVSYFLSHFHSDHYGGLSPNWSQGLVFCSPTTARLLTDVLNVSSLFVVPLPLGQP
LLIDGCEVVLIDANHCPGAVQFLFKVPASNGDFQRYVHTGDFRFSAPMKLDPFLRNFVGS
DAVFLDTTYCNPKFVFPSQEESVDYISSLIERVGGEHEVSMKSVLFLVATYVIGKEKILI
EIARRCKRKVYVDARKMAVLRVLGYGDSGVFTEDECESDVHVVGWNVLGETWPYFRPNFV
KMEEIMVERGYSRVVGFVPTGWTYEVKRNKFSVRSKDAFEIHLVPYSEHSNYDELREYVR
FLKPKRVIPTVGSDVEKIDSKQASKMQKHFAGLIDEMANKKEFLQGFHRGTTEGGGKVDS
DAKDYTMEGQDQEKKATPSDIDTMGDTNVGFGKELLSPLQEPDSQTPILLTDEKAEEIIQ
QLRDCLPSWVTRQQMLDLIGSSGGDIVEAVTKFYDRETEFHDQGIASTSAVSVSETSSLC
DTASPTKAGSVHANIDVSSSQAHISPNPRNIVKSGISPGKRGRKISNKVNKKVKLQSKLN
LCGPKQSTITRFFSKVLPDVTESAEIGSVGEQNPKDKKLPDHVTQSYKDAIDQFLQIIDG
NESLKSYAGTILQKANGDISMAVDIHYRNNEGRSDENEVELVVDAKSVQSKCGIDNSSSV
QKKIELGKIGVVADLSVRGSLPDNVAATSVSLPPEKYNPVDHACWSNGQHAPYLHLARTF
DLLEDEKGKIKATSMLCNMFRSLLALSPDDVLPSVYLCTNKIAADHENVELNIGGSLVTA
ALEDACGTSRSKIRDMYNELGDLGDVAQACRQTQTLLAPPPPLLIKDVFSALRKISVQTG
TGSSARKRSLIVNLLRSCREKEMKFLVRTLVRNLRIGAMMKTVLPALAQAVVLNSFHSCN
HEGTIESLKDKLQRHSAAVVEAYNVLPNLDLVIPSLMKRGIGFSSSTLSMVPGIPIKPML
ARITNGVQQALKLFENKAFTCEYKYDGQRAQIHKLVDGSMHVFTRNGDESTSRFPDLINI
INQSCKPDAVTFILDAEVVGVDRKNGCKLMSFQELSSRGRGSRDASITLDSIKVNICVFV
FDIMFANGQQLLSFPLRRRRKYLKELFYDEKLGYFEYAKEMTVEAEDACLTSEATLTKIN
SFLENAFVSSCEGIIVKSLDVDAGYSPSKRTDTWLKVKRDYMEGLGDTLDLVPIGAWHGN
GRKAGWYSPFLMACYNPETEEFQSVCRVMSGFSDLFYTEMKSFYSGDKILAKKPPYYRTA
EVPDLWFSPELVWEIRGADFTVSPVHQAALGLVHPSRGISIRFPRYIRTVTDRKPDECST
ASDLAEMFHSQTRKMDVASEDGS
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcttgatgacggctctagattctacggacctcttcctgactgccctaaccgcc
ttttcccacccacccagacccataccccgtccccttgaactctctctccctccaattccc
tccacattcccccactccaaactcatccccagaacccgtttcgccctcgacgcattccgc
tatgccggcgattattccgtctcttacttcctctctcacttccactccgatcactacggc
ggtctctcccccaattggtcccaaggcctcgtcttttgctcccccaccaccgctcgtctt
ctcacagacgtcctcaacgtctcttcgcttttcgtggttcctctgccgctcggacagccc
cttctcatcgatggatgcgaggtcgtgcttattgacgccaatcattgcccgggcgccgtt
cagttcttgttcaaagttcccgcctccaatggagacttccagaggtatgttcacactggt
gattttcggttttctgctccgatgaagctagacccttttctccgtaactttgtgggttca
gacgccgttttcttggatacaacttattgcaatcccaaattcgtgtttccttcacaagaa
gaatctgttgattatatttctagcttgatagaaagagtcggaggtgaacacgaagtttct
atgaaaagtgttctgttccttgttgctacatatgtgattgggaaagagaagattttgata
gaaattgctcgtagatgtaagcgtaaagtgtatgtggatgctcgaaaaatggcggtgctg
cgtgttttgggttacggagacagtggggtgtttacagaggatgaatgtgagagtgatgtg
catgttgttgggtggaatgtgttgggtgagacttggccatatttcaggccaaattttgtg
aaaatggaggagattatggttgagagggggtattccagggttgtagggtttgtccctact
ggctggacttatgaagtcaagcgtaacaagttctcggtgaggtcaaaggatgcttttgag
atccatcttgtaccctacagtgagcattcaaactatgatgaacttagagaatacgtcagg
tttttgaaaccaaagcgtgtgattcctacagtgggctccgatgtggaaaagatagacagt
aaacaggccagtaaaatgcaaaagcattttgctgggttaattgatgaaatggccaacaaa
aaagagttcctgcagggttttcatcgtgggactacagaaggaggtgggaaggttgacagt
gatgccaaagattacaccatggaggggcaggatcaagagaaaaaggcaacaccttcagat
attgatactatgggagatactaatgtaggctttggtaaggaattgttgtctcctctccaa
gaacctgattcacaaactccaatattgttaactgatgaaaaagcagaggaaattattcaa
caacttcgtgattgtttgccgtcatgggtcactcgccagcagatgctagatctgattggg
agctcaggaggggacattgttgaagcagtcactaaattttacgatcgtgaaacagaattt
catgatcaaggaattgcctctacaagtgccgtatctgtatccgagaccagctcactctgt
gacacagcatcaccgacaaaagcaggttctgttcatgcaaatattgatgtttcttcaagc
caagctcatatttcacccaacccaagaaatattgttaaaagtggcatttcccctggaaaa
agagggaggaagatcagtaataaagttaacaagaaagtaaagttacagtcaaaattgaat
ttgtgtgggccaaaacaatcgacaataacaaggttttttagtaaagttttgcctgacgtt
acagaaagtgcagagattggatcagtaggtgaacaaaaccctaaagataaaaaattacca
gatcatgtcacccaatcatacaaggatgcaatagatcaatttcttcagataatagatggc
aatgaatcattaaaaagctatgctggtaccattcttcaaaaggcaaatggggatattagt
atggctgtggatatacattaccgtaataatgaaggcaggtctgatgagaatgaagtggag
ctggtggttgatgcaaaatcagttcagtccaaatgtggtatagataactcttcttctgtc
caaaaaaaaattgaattagggaaaataggagtggtagctgatttgtctgtacgggggtca
ttaccagataacgtcgctgcaacttctgtgtcactaccaccagaaaaatacaatcctgta
gatcatgcatgctggagcaatggacaacatgctccatatttacatcttgcacgaaccttt
gacttactagaggatgaaaaaggcaagataaaggctacttctatgctctgcaatatgttc
agaagtttgcttgccctgtctcctgatgatgtgctgccttcagtttatttgtgcaccaat
aagatagctgcagaccacgaaaatgtggaactgaacattggtggaagtttggtcacagca
gcactggaggacgcatgtgggacaagcagatccaaaatcagggatatgtacaatgaattg
ggagatcttggtgatgttgctcaagcatgccggcagacacagactttgcttgcccctcct
ccaccacttctaataaaagatgtattttctgcactccggaagataagtgtacaaacaggt
actggaagcagtgctcgaaagagaagcctgattgtgaatctcttgcgttcttgcagagag
aaagagatgaagttccttgttagaactttggttcgaaacttacgtatcggagcaatgatg
aaaactgtcctacctgctctggctcaagctgttgttctgaattccttccatagctgtaat
cacgaaggaactatagaaagtttgaaggacaagcttcagcgccattcagcagctgtagta
gaagcatacaatgtactgcccaatttggatttggtcattccttctctcatgaaaagaggc
attggattctcctcatcaactttgtcaatggttccaggaatacctatcaagccaatgctt
gcaagaatcacaaatggtgttcagcaagcactgaagctatttgaaaataaagcttttaca
tgtgaatacaaatatgatggccagcgtgcacaaattcataaactagttgatgggtccatg
catgtttttacaagaaatggggatgagtcaacttcgagatttccagatctgattaatata
atcaatcaatcttgtaaacccgatgcagtgactttcatactggatgcagaggttgttgga
gttgataggaagaatggttgcaagctaatgtccttccaagaattatcttcacgtgggaga
gggagcagagatgcatcaataacgttggatagcataaaggtcaacatttgcgtctttgtc
ttcgacatcatgtttgccaatggacaacagttgttaagctttcctctgcggagaaggcga
aagtatttgaaagagttgttctacgatgagaagttgggttactttgaatatgccaaggaa
atgacagttgaggcagaggatgcttgtttaaccagtgaagcgacattaaccaaaataaac
tctttccttgaaaatgcatttgtttcctcttgtgaagggattatagttaaatctttagat
gttgatgctggatattctccatcaaagcgtacagatacttggttaaaggtcaagcgagac
tacatggagggattgggcgatactcttgatttagtcccaattggagcttggcatggaaac
gggagaaaggcaggctggtacagtccatttctcatggcatgttacaatcctgaaactgaa
gaatttcaaagcgtctgtcgtgttatgtctgggttttcagatttattttatacagagatg
aaaagtttttattctggggacaagatcttggccaaaaaacctccttattatagaacagct
gaggtgcctgatttgtggttttctcctgagcttgtatgggaaataagaggtgcagacttt
acagtgtctccagttcaccaggctgctttaggtctagttcatccatcacgtggcatttcc
attcgattcccaagatacattcgcactgtgactgatagaaaaccagatgaatgtagcaca
gcttctgatttagctgaaatgtttcattctcagacgaggaagatggatgtggcttctgaa
gatggcagctga
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