Rosa chinensis (China rose): 112192777
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Entry
112192777 CDS
T06020
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00450
Selenocompound metabolism
rcn00970
Aminoacyl-tRNA biosynthesis
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
112192777
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112192777
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcn01007
]
112192777
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112192777
Enzymes [BR:
rcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
112192777
Amino acid related enzymes [BR:
rcn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112192777
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112192777
Prokaryotic type
Other AARSs
112192777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
112192777
NCBI-ProteinID:
XP_024188413
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All DBs
Position
3:complement(29096521..29101753)
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AA seq
612 aa
AA seq
DB search
MAAAAAGARINCFFLNPINPLNSKTTTRLTTHLHFRLSRKTPPTFCTRASATTPDETSAA
ANDPFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLGKRVIFITGTDEHGEKIAAAA
AANDSTPAQHCDLISQSYVTLWKDLDIGYDKFIRTTDPKHEAIVKEFYSRVRDNGDIYRA
DYQGLYCINCEEYKDEKELLENNCCPTHLKPCVARKEDNFFFALSKYQKPLEETLAKNPN
FVQPSYRLNEVQSWIKSGLRDFSISRALVDWGIPVPNDSKQTIYVWFDALLGYISALSED
MEQPSLERAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGLGLPKMVFGHGFLTKDGMK
MGKSLGNTIEPNDLVQKFGSDAVRYFFVREVEFGGDGDYSEDRFINIVNAHLANSIGNLL
NRTLGLLKKNCQSTLVIDSSIAAEGTTFKDTVEKLVEKARVDYENLSLSSACEAVLEISN
AGNSYMDGRAPWSLFKQGGAASEAAAKVVILHVINDLVIILEAMRVIAIALSPVTPSLSW
RIYRQLGYSKDQFYAATWSDTRWGGLKGGQVMAQPQPIFARIESQTEEENRVEAPKKVKK
NKLPQSQQVVEA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcagcagcaggggctagaataaactgctttttcttaaaccccataaatccc
ctcaactccaaaaccaccacccgtctcaccacccacctccactttcgtctttcaagaaaa
acgccacccaccttttgcacccgcgcctccgccactactcccgacgaaacatccgccgcc
gccaatgacccttttgtcctcacaactcctctttattacgtgaacgcccctccccacatg
ggcagtgcctacaccaccatcgccgccgacgccattgctcgcttccagaggctgctgggc
aagagagtcattttcattaccgggactgatgaacacggtgaaaagattgctgccgctgcc
gcagctaatgactccacccctgcacaacactgcgacctcatttcacagtcttacgtcact
ctctggaaagatttggatataggttatgacaagtttattcggacaactgatcccaagcat
gaagcgattgtgaaggagttttactctagggtccgtgacaatggagacatttatagggct
gactatcagggactttattgtatcaactgtgaagagtataaggatgagaaagaactgctt
gagaataactgttgccccacgcatctaaagccatgtgttgcacggaaagaggataatttc
ttctttgcattgtccaagtatcagaagccgctggaagaaactttggccaaaaatccgaat
tttgtgcagccttcataccgtcttaatgaggtgcaaagttggattaaaagcggcctaaga
gacttttccatttctcgagcattagtggattggggcatcccagttcctaatgatagcaag
caaaccatatatgtttggtttgatgctttattgggttatatatcagcactttcagaggat
atggaacaacctagtttagaaagagctgtttcatcaggatggcctgcctcgctacacttg
attggcaaggatattttacgtttccatgcagtatactggccagctatgctaatgtctgct
ggactgggccttcccaagatggtgtttggccatgggtttttgacaaaggatggtatgaag
atggggaagtcactagggaatacaattgaaccaaatgatttggttcaaaaatttgggtct
gatgcggtcaggtacttcttcgtcagggaggtggaatttggtggtgatggggattattca
gaagatcgtttcatcaatattgtcaatgctcatcttgccaattcaatcggaaatctgctt
aaccgcactctggggcttcttaagaagaactgccaatctactttggtaattgattcaagt
atcgcagctgaaggaactacattcaaggacactgtggagaagttggttgaaaaagctcgg
gttgattatgaaaacctctcactatcatcagcttgtgaggctgttcttgagatcagcaat
gctggaaattcatacatggatgggcgtgcaccatggtctctctttaagcaagggggtgct
gcaagtgaagctgctgcaaaggtggtcattttgcatgtcataaatgaccttgtgataata
ctagaagcaatgagggttatagctattgcattatcccctgtcacaccaagtttaagttgg
agaatatatcgacagcttggctactcaaaggatcagttttatgctgctacctggagtgac
accaggtggggtgggcttaaaggtggtcaggtcatggctcaacctcaaccgatctttgca
aggattgaaagccaaacagaagaagaaaatagggtcgaagcacccaaaaaggtgaaaaag
aacaagttaccacagtctcaacaggtggttgaagcttaa
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