Rosa chinensis (China rose): 112197068
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Entry
112197068 CDS
T06020
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL28 isoform X1
KO
K12900
serine/arginine-rich splicing factor 10
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112197068
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112197068
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112197068
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112197068
Spliceosome [BR:
rcn03041
]
Common components
Common spliceosomal components
SR proteins
112197068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
112197068
NCBI-ProteinID:
XP_024193371
LinkDB
All DBs
Position
4:46296927..46301331
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AA seq
264 aa
AA seq
DB search
MARYRSRSRSLSRSYSPPRRRSRTPPRGRKRYDDDEPRDRYRDSRSYRDRRSPAPSGLLV
RNLPLDARSDDLRIPFERFGPVKDVYLPKNYYTREPRGFGFVKYRYAEDAAEAKQQMNHK
LIGGREIRIVFAEENRKTPQEMRTTTRVSGGSSRRRRTPPRSPRRQYRSYSRSVSPLRRD
SRDHGARDHYRSPVQSRSISQSPSPHDERDYRRSPSSRENGRSPRDERDGQDLRDERVYA
PSRLRSPRGNRHSPLSRSRSYSPR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggccaggtaccggagccgcagccgcagcctgagcagaagctacagcccccctcgccgg
cgtagcagaactccgccacgtggacgcaagcgatacgacgacgacgagcctcgcgaccgc
taccgtgacagccgctcttaccgagaccgccgctcaccggctccgtctggcttgctcgtt
cgcaatcttcctcttgacgctaggtcagatgatcttaggatcccttttgagcgctttggt
ccagtgaaggatgtttatcttcctaagaattactacaccagggagccacggggctttggc
tttgtgaagtaccgttatgcagaggacgcagcggaagcaaagcaacaaatgaaccataaa
cttattggtggacgtgaaataaggattgtttttgctgaggagaacagaaaaactccccaa
gaaatgcgcacaacaactcgtgtaagtggaggaagctctagaagaagaagaactccacct
aggtctccaagacggcaatatcgttcctactcccggtcagtttcacctcttaggcgcgac
tcaagggaccatggagctagggatcattatcgttcccccgtgcagtctagatcaatttca
caatctccttcaccacacgatgaaagagactacaggcggtccccaagttctagggagaat
ggacggagtccacgtgatgagagagacggtcaggatctgcgtgatgagagagtctatgca
cctagcaggttaaggagtccaaggggtaataggcacagtcctttgtcacgctcacggtca
tacagtcctcgctga
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