Rosa chinensis (China rose): 112200133
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Entry
112200133 CDS
T06020
Name
(RefSeq) pleiotropic drug resistance protein 3 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112200133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112200133
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112200133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_25
ABC2_membrane_3
AAA_29
ABC_trans_N
AAA_16
AAA
RsgA_GTPase
AAA_23
AAA_18
SMC_N
Rad17
AAA_33
AAA_22
AAA_30
nSTAND3
NACHT
RNA_helicase
AAA_5
RuvB_N
AAA_28
TIP49
AAA_11
AAA_17
AAA_19
Motif
Other DBs
NCBI-GeneID:
112200133
NCBI-ProteinID:
XP_024196912
LinkDB
All DBs
Position
4:complement(52597169..52605343)
Genome browser
AA seq
1452 aa
AA seq
DB search
MAQLAGADEIESFRIELAEIGRSIRASFRSHASSFRSTSTVNAGDSRMDDDEEYYDLQWA
AVERLPTFERIKSALFDDHDGASAKGDVKGTRVVDVTKIGAQERRVFIEKLIKHIENDNL
QLLQKIRRRIDKVGVKLPTVEVRYKNLCVEAECKVVHGKPLPTLWNSLKSLIPDITELVG
SKKREAKISILKDVSGIIKPGRMTLLLGPPGCGKTTLLMALSGKLSHSLKVSGEISYNGY
RLEEFVPEKTSAYVGQYDMHIPEITVRETLDFSAGCQGVGSRPEIMMEVSRREKQAGIVP
DPDVDAYMKAISVNGLKSTLQTDYILKILGLDICADTLVGDPIRRGISGGQKKRLTTGEM
IVGPAKAVFMDEISNGLDSSTTFQIVSCLQHFVHITDATSLISLLQPAPETFNLFDDVLL
MAEGKIVYHGPRTSILQFFEECGFKCPERKGVADFLQEVISRKDQAQFWDGTEKPYSYFS
VDQFIEKFKDCHLGRKLDVDLSEPFDKSQSHRDALSFKRYSLPKWELFKACTRREFLLMK
RNSFIYVFKSVQLVIISSITMTVFLRTQMAIDTIHANYYMGSLFFALVILLVDGFPELSM
TVSRIVVFYKQKELCFYPAWAYAIPAAILKVPLSFLEAFVWTALTYYVIGYSPEVGRFFR
HFLLLFAMHLTSISLFRFIASVFQTVGPSMTAGVLSILFVMLFGGFVMPKPYMPVWLKWG
FWVSPLTYGEIGITVNEFLAPRWEKVSGNTTLGKQVLESRGLHFDDYFYWISVGALMGFT
LLFNIGFTLALTFLKSPGKSLSLISYEKYHQLQGQRDDRGSLDAEGKSTGEPKTSVEPKK
GRMVLPFEPLTVTFQDVQYYVDTPLEMRKGGFEHNKLQLLSDITGAFRPGVLTALMGVSG
AGKTTLMDVLCGRKTGGTIEGEIRISGYPKVQDTFARISGYCEQNDIHSPQITVEESVVY
SAWLRLPSQIDSKTKAEFVNEVLETIELDGIKDSLVGMAGVGGLSTEQRKRLTLAVELVA
NPSIMFMDEPTSGLDARAAAIVMRAVKNVVATGRTVVCTIHQPSIDIFEAFDELILMKIG
GRIIYSGQLGRHSSMVIEYLESIPGVPSIKDNYNPATWMLEVTSKSAEADLGIDFAQIYR
ESALYEKNKELVKQASSPSPGSKDLEFPTRYPLNGWGQFKACFWKQNLSYWRSPSYNLAR
ILFMCFSAVLFGTLYWNQGEKINNQQELFNVFGSMFVEIIFFGIYNSTTVLPFVATERNV
LYRERYAGMFSSWAYSFAQVLVEVPYSFTQAVLYVVITYPMIGYHLSAYKIFWSFYSMFC
VLLYFNYLGMLLVSLTPNVQVAAIVASSSYTMLNLFSGFIVPGPQIPKWWLWLYYLSPTS
WALNGMLTSQYGDVQKEIVVFGETKTVAAFLEDYFGYHHNLLGLVGVVQLLFPIVFASLF
AYFIGKLNFQKR
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttggcaggagcagatgaaattgagtctttcaggatagagctagcagagatt
gggaggagcattagagcctcctttcgaagccatgcctcaagtttccgaagcacctctact
gtcaatgccggagacagtagaatggacgatgatgaagaatattatgacttgcaatgggct
gcggttgagagactaccaacttttgagaggatcaaatcagctttgtttgatgatcatgat
ggcgcatcggcaaaaggagatgttaaggggactagggtggttgatgttacgaagattgga
gctcaagaaaggcgtgttttcatagagaagctcatcaaacatattgagaatgataatctt
cagctgttgcagaaaattagaagaagaatagacaaggttggtgtgaagttgcccactgtt
gaagtaagatacaagaatctttgtgtggaagcagagtgtaaggtagttcacggcaagccc
ctccccactctatggaattctctaaagagtttgattccggacattactgaactagtaggt
tcaaaaaaacgtgaagcgaagataagcatcctcaaagatgtcagtggcattattaagccg
ggaagaatgaccttattgcttggccctccgggttgtggcaaaaccacattactgatggca
ctctcaggaaagctaagccattctctcaaggtttctggcgaaattagttacaatggttat
agacttgaagaatttgttccagagaaaacctcagcctatgtaggccaatatgatatgcat
attccagagatcactgtaagggaaacactagatttctctgcaggctgtcaaggtgtagga
agccgacccgagattatgatggaagttagtagaagagaaaagcaggcaggaatagtcccg
gatcctgatgtagatgcttacatgaaggccatatctgttaatggactgaaaagtacactt
caaactgactatattctaaagatacttggccttgatatatgtgctgacacgctggttgga
gatcccataagaagaggaatatctggtggtcaaaagaaaaggttaactacaggggagatg
attgttggacctgcaaaagctgttttcatggatgaaatatctaatggcttagatagttcc
acaactttccaaattgtttcttgtcttcaacattttgtgcatataacagatgctacatca
ttgatctcacttcttcagcctgcaccagagacgttcaatctctttgatgatgttctctta
atggcagaagggaagattgtgtatcatggaccaagaacttctatcctccaattttttgag
gagtgtggatttaagtgtccagaaagaaaaggtgttgctgacttccttcaggaggtcatc
tctagaaaagatcaagcacagttttgggacggcacagaaaaaccatatagctacttttct
gttgatcagttcattgagaaattcaaggattgccatcttggcaggaagctagatgtggat
ctctcagagccattcgataagtctcaaagccacagagatgctctatcctttaaaagatac
tcattacctaaatgggaactgtttaaagcatgcacaaggagggaatttcttttaatgaaa
aggaattctttcatttatgttttcaaatcagttcagctagtcatcatttcttctataacg
atgactgttttccttcgaactcaaatggctattgacacgatccatgcaaattattatatg
ggttctttgttctttgcacttgtgatacttcttgttgatggattcccagaattgtcaatg
actgtctcaagaattgtggttttctacaaacagaaagagttgtgtttttaccctgcttgg
gcttatgcgatcccggctgccatcctaaaggttccactttcgttcttggaggcttttgtt
tggactgctcttacatactatgttattggttacagccctgaggttggaaggttcttccgc
catttccttctactctttgctatgcacctaacatcgatatccttgtttcggtttattgct
tcagttttccaaactgtcggtccttctatgacagctggtgttttatcaatattgtttgtt
atgttatttggtggctttgttatgccaaagccttatatgccagtttggttgaagtgggga
ttttgggtgtctcctttgacatatggagaaataggcataacagttaatgaatttctggca
cctcggtgggaaaaggtgtctggaaacacaactcttgggaaacaagtgctggaaagccgc
ggattgcatttcgatgactatttttattggatatcagttggtgctttaatgggattcaca
ttactattcaatattggtttcaccttggctttaactttcttgaagtctcctggaaagtct
ctttctcttatttcttatgaaaagtaccatcaactacaaggacaaagagacgacagaggc
agtttagatgcagagggaaaatccaccggtgaacctaagactagtgtagaacctaagaag
ggaaggatggttttaccatttgagcccctaactgttacattccaagatgtacaatactat
gttgacacccctttggaaatgagaaagggaggctttgagcataacaagctccagctccta
tctgatattacaggtgcattcaggccaggtgttctgacagcattaatgggtgtcagcgga
gctggcaaaacaactctcatggatgttctttgtggacgaaaaaccggtggtacaattgaa
ggagaaataagaatcagtgggtatcctaaggttcaagacacatttgcaaggatatcaggc
tactgtgagcaaaatgacatacattctccacaaataactgtggaagaatcagtagtatat
tctgcttggttgcggctcccgtctcagattgattcaaagaccaaagcagaatttgtaaac
gaggttcttgaaactattgaacttgatgggattaaagattccttagtaggcatggcagga
gttggtggtttatccactgagcaacgtaaacggttgaccctagctgtggaacttgtagcc
aatccatctatcatgttcatggatgaaccaacttctggtttagatgcacgggcggctgct
atcgttatgagagcagtgaagaatgttgttgcaacaggaagaacagttgtttgcaccatc
catcaaccaagtattgacatttttgaggcatttgatgagttgattctcatgaaaattgga
ggacgcataatctattctggccaacttggacggcactcaagcatggttattgagtatctt
gagagtatccctggggtgccctcaatcaaagacaattacaatccggcaacatggatgtta
gaagttacttcaaaatctgcagaagctgaccttggtatagattttgcacaaatttatagg
gaatcggccttgtatgagaagaacaaggagttagtcaagcaagcgagttcaccgtctcct
ggttcaaaggatttggagtttcctacccgctatccactaaatggttgggggcagttcaaa
gcgtgcttttggaaacagaatttgtcttattggagaagtccctcatataatctggcacgg
atccttttcatgtgtttctcagctgtgttgtttggaacactgtactggaatcaaggagag
aaaataaataaccagcaggagctcttcaatgtgtttggttcaatgttcgtggaaataatc
ttctttggcatttacaatagcacaacagttctaccatttgttgcaacggaacggaatgtt
ctgtatcgagaaagatatgcaggaatgttctcttcatgggcctattcattcgcacaggtc
ctggttgaggttccctactcattcactcaagcagttctttatgtggtcatcacatacccg
atgattggctaccacttgtctgcctataagatattttggtcattctatagcatgttctgt
gtactactatacttcaactacctagggatgctgctggtgtccttgacaccaaatgttcaa
gtggctgcaattgtggcgtcatcttcctacacaatgctgaatttgttttcagggttcatt
gttccgggaccacaaatcccaaagtggtggctctggctgtattatttgtctcctacatca
tgggcactgaacggaatgcttacttcgcagtatggagatgtgcagaaagaaatcgtggtg
tttggagagacgaaaactgttgctgcttttttagaagattactttgggtatcaccacaac
ctgttaggccttgtcggtgttgttcagcttctcttccccattgtgtttgcttctctgttt
gcatacttcattgggaaactaaacttccaaaagagataa
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