Rosa chinensis (China rose): 112201551
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Entry
112201551 CDS
T06020
Name
(RefSeq) leucine-rich repeat receptor protein kinase HPCA1
Organism
rcn
Rosa chinensis (China rose)
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_1
LRR_8
LRR_4
ABC1
Pkinase_fungal
APH
Beta-APP
Motif
Other DBs
NCBI-GeneID:
112201551
NCBI-ProteinID:
XP_024198220
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Position
5:complement(37063333..37069560)
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AA seq
941 aa
AA seq
DB search
MGRARAIGAFAVLVLVQFFVIAAEANTQEYGYMQILMDEWNIKPPSWVSADPCDGWEGIK
CTNSRITALVLADMGLKGQLPTDIELLSELQILNLSFNKGLTGQLRASIGKLTKLVHLNL
VGCSFFGPIPDAIGSLTKLSYLSLKNNSFSGPIPPSIGNLANLTFIDLSDNKLQGSIPVS
NGTTLGLDKLLKARHFHFGNNQLSGPIPPRLFSSTMAMIHLIFDRNNLSGSIPSTVGLVQ
TLLAVRLDGNSLSGSVPSSLNNLTNVSELHLSNNMLTGPMPNLTGMNSLNYVDLSNNTFA
VSEVPTWFSTLKLLTTLMMENTGLQGEVPRALFGFGNLETVVLRNNLLSGLLDVGNSSNQ
LQLIDLQRNFITELAPSKEGSNYTLILVNNPICEGSQTNNYCIVSPTNAPNEMSPTLSNC
TAVACPSGQVSSPNCKCASPYRGTLVFIFVSFSNLGNFSYYRELEKAIMKSCQSFNLPVD
SVSLGRPSWGSSFHLELVIEVFPSGDQVRFNQTGASAIASVLSNQTLEGRPIFFGPYSVF
YPSGSSGGSNKGLIIGASIGGSVLLLLIVLVGFYALYQKRRGDSPSRGSILMQTGVSNVS
GPQLKGARLFSFEELKKYTNGFSEENDIGSGGYGQVYRGTLPMGQTVAIKRAKRESMQGA
PEFKAEVELLSRVHHKNLVSLVGFCLDQGEQMLVYEYVQNGDLLDSLLGKSGIRLDWMRR
LKVALGAAKGLAYLHEHANPTIIHRDIKSNNILLDKDLEAKVADFGLSKSMADSGKDYVT
TQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITARRPIERGKYIVRVVQSAMDKS
KDLYNLHEVLDPAIDLENDQLKGLEMFVNLAMLCVDELRAKRPSMGAVVKEIENIIQISA
TNWNAGANSAATSASYEDVSREVSKDLYSVLDYSVAVQGRR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtgctcgagccattggtgcgtttgcggtgcttgtgttagtccagttctttgtt
attgcagcagaggcaaacactcaggaatatggttacatgcagattctcatggatgagtgg
aatataaaacctcctagttgggtgagtgccgatccttgtgacggctgggaaggtattaag
tgcaccaattcacgcatcactgccttagtgttggcagacatgggtttgaaaggccagcta
ccgactgatatcgagttgttatctgagctacaaattctgaatttatctttcaacaagggc
ctgacaggacaacttcgagcttcaattggaaaattgacgaaactagtacacttaaacctg
gttggttgcagtttctttggtcctattccagacgctataggatctctaacgaagctgtct
tacctatctctgaaaaacaatagtttcagtgggccaattccgccttccattggtaatctg
gccaatcttacttttatagacctatctgacaacaagcttcagggatccatcccagtctct
aatgggactacacttggtcttgataagttacttaaggcgagacactttcattttgggaac
aatcagctctcgggcccaattccacctcgacttttcagctcaacgatggccatgatacat
ttaatttttgacagaaacaatctaagtggtagcatcccttcaactgttggacttgttcag
acattgctggcggtacgcctggatggaaattcattaagtgggagtgtgccttcgagcctc
aacaaccttactaatgtgtctgaactgcacttgtccaataatatgctgactggccctatg
cccaaccttactggcatgaattccctcaactatgtggatttgagcaacaatacttttgct
gtgtcggaggttcctacctggttttctaccttgaagcttttgacaacattaatgatggaa
aacacggggcttcagggagaagttcctcgtgccctctttggctttgggaatttggagaca
gtggtactgcggaacaaccttctcagtggcttattggatgttggcaactccagcaaccag
ttgcaactaattgatctgcagcggaacttcattactgaacttgcaccaagcaaggaagga
tcaaactacacattgatactggttaataatccaatttgtgaggggagtcagactaataat
tactgcattgtttctccaactaatgcaccaaacgaaatgtcaccaactttaagtaactgt
acagctgttgcttgtccttcaggccaggtttcttcccccaactgtaaatgtgcatctccc
tacagaggaactctagtcttcatatttgtttctttctcaaatttgggaaactttagttat
tacagagagcttgagaaagctatcatgaaaagttgtcagtcctttaacctccccgtggat
tcagtttctctgggccgtccttcctggggttcatcttttcatcttgagctagtcatagaa
gtcttcccatctggtgatcaagtgcgcttcaaccaaacaggagcttcagctattgcttct
gttttaagcaaccagactctcgaagggcgtccaatattttttggaccctactctgtgttt
tatccttccggtagctctggaggatcaaataagggactgataattggtgcatccattggt
ggttctgtgcttctgttattaatagtccttgtagggttttatgctctctaccaaaagagg
agaggagactcgccatcacgtggatcaatcctcatgcagacaggggtttcaaatgtcagt
ggtccacagttaaaaggagcaaggttgttctcttttgaagagctgaagaaatatacaaac
ggtttttcagaagaaaatgatattggatctgggggttatggccaggtgtatcggggaact
cttcctatgggccaaacggttgccattaaaagagctaaacgggaatctatgcaaggtgcg
cctgagttcaaggccgaggttgagcttctatcaagagtacaccataagaatcttgtcagc
cttgttggtttttgtttggaccaaggagaacaaatgttggtatatgagtatgttcaaaat
ggtgatctactggatagtcttttaggaaagtcaggaatcaggttagactggatgaggaga
ctgaaagttgctcttggtgcggcaaaaggtctagcatatcttcatgaacatgcaaaccct
accattattcaccgtgacatcaaatcaaacaacatcctactagataaagatctggaagca
aaagttgctgactttggtctctccaagtctatggctgacagtggaaaggattatgttact
actcaagtcaaagggacaatgggctacttggatcctgagtattacatgactcaacagtta
actgagaagagtgatgtatatagcttcggtgtggtaatgttggagctgataactgcgaga
aggccaatagagcgagggaagtacattgtgagagtggtacagtcggcaatggataagtca
aaagatttgtataaccttcatgaagtacttgatccagccattgatttagaaaatgatcag
ctgaaaggtttagaaatgtttgtcaatttggcaatgttgtgtgtagacgaattacgggct
aagaggcctagtatgggtgcagtggtaaaagagatagagaatataatacagatttctgct
actaattggaacgccggtgccaattcagcagctacttcagcaagttatgaggatgtgagt
agagaagtttccaaagatctttacagcgtcttggattatagtgtggctgttcaaggacga
agatag
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