Ricinus communis (castor bean): 8267725
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Entry
8267725 CDS
T01087
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8267725
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
8267725
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_III
AAA_14
Apolipo_F
AAA_27
Motif
Other DBs
NCBI-GeneID:
8267725
NCBI-ProteinID:
XP_048229689
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Position
5:7190548..7201400
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AA seq
826 aa
AA seq
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MEEDGGERSSIVIGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYDPM
VVIVPPNKMAPDGMVGVSELVDRFYALVKKVVMARGCFDDTKGAVLIKSLAATEPSALGL
DTYYKQYYLCLAAAAATMKWIEAEKGVIVTNHSLLVTFNGSFDHMNIDATSVQNLEIIEP
LHSSLWGTTNKKRSLFHMLKTTKTVGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTNEVLGDNARKSQVLISSIILLKTALDALP
LLSKVLKDAKSFLLANVYKTICENEKYASIRRRIGEVIDEDVLHARVPFVARTQQCFAVK
AGIDGLLDIARRTFCDTSEGIHNLANKYREEFKMPNLKLPFNSRQGFYFSIPHKDIQGKL
PSKFIQVLKHGNNIHCSTLELASLNVRNRSAAEECYIRTEVCLEALLDAIREDASALTLL
AEVLCLLDMLVNSFAHTISTKLVDRYTRPEFTSSGPLAIDAGRHPILESIHNDFVPNNLF
VSEASNMVIVMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFLTIRIVDRIFTRMGSVDN
LESNSSTFMTEMKETAFIMQNVSQRSLIIMDELGRATSSSDGFSIAWSCCEHLLSLKAKS
SAAHKMLGGFCLRRVVSANTCDRDVLECLTFFRYTIFATHMENLSELATIYPNVKLLHLD
VTVKNNRLDFKFQLKDGPRHVPHYGLLLAEVAGLPSSVIETARSITSKIKEKEITQMEVH
CHQYRQLQMIYHVAQRLICLKYSSQDEDSIRQALQNLKESYMDGKI
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatggaggagaaaggtcaagcatcgtgatcggcctaatagaaaacagagcc
aaagaggtgggaatggctgcttttgacttgaggtcagcttcattgcatctttctcaatat
attgaaacaagtagctcttaccagaatacgaagaccttgttgcaattttatgatcctatg
gtggtcattgttcctccaaataaaatggcacctgatggaatggttggagtttcagaattg
gttgatcgattctatgctttagtcaagaaggttgtgatggcccgtggttgctttgatgac
accaagggtgctgtactaattaaaagtttagcagccacggaaccttcagcacttggtctt
gatacttactataagcagtattatctctgcctggctgctgctgcagctacaatgaagtgg
atagaagctgagaaaggggtcattgttacaaaccattcattattggttacctttaatggt
tcatttgaccacatgaatattgatgcaactagtgtccagaatctggaaatcattgagcca
cttcattcttccctttggggcacaaccaacaagaaaagaagtctattccatatgcttaag
acgacaaaaactgtaggagggactagacttctacgtgccaatctgttgcagcctttaaaa
gatattgaaactatcaatactcgtcttgattgcttggatgaactgatgagcaatgagcaa
ctgttctttggactctctcaggttctgcgtaagtttccgaaagagactgatagagtactc
tgccatttctgctttaagccaaagaaagttacgaatgaggttttgggtgataatgctaga
aagagtcaggtgttgatatcaagtattattttacttaaaactgccctagatgcgttacct
ttactctcaaaggtgcttaaagatgcaaaaagttttcttcttgcaaatgtttacaagact
atatgtgaaaatgagaaatatgcttccatcagaagaagaattggagaggtgatagatgaa
gatgtgcttcatgcacgggttccctttgttgcccgaacgcagcagtgttttgctgtcaag
gctgggattgacggacttctggatattgcacggagaacattttgtgataccagtgaaggt
atacataatcttgcaaacaagtatcgtgaagaattcaagatgccaaacttgaaacttcca
tttaatagtagacaaggcttttactttagcattccacataaggacatccagggaaagctg
ccaagcaagtttattcaggtcctgaaacatggaaacaatatacattgctccaccttagaa
cttgcttccctgaatgtcagaaataggtctgcagctgaggaatgctatataagaacagaa
gtttgccttgaagctctattagatgctataagggaggatgcctctgcactcacactgctt
gctgaggttttatgcctgttggatatgcttgttaattcatttgctcatacaatttcaact
aagctcgttgaccgttatactagaccagaattcactagtagtgggccattggcaattgat
gctggaagacaccctatcttggaaagcatacacaatgactttgttccaaacaatctcttt
gtttcagaagcatcaaacatggtcattgtcatgggaccaaatatgagtggaaagagcact
tatcttcaacaagtttgtcttattgtcattttggctcagatcggttgttatgttcctgct
cgcttcttaactataaggatagttgatcgtatatttacgaggatgggttcagttgataat
cttgaatccaactccagtacgtttatgacagagatgaaagagacagctttcattatgcag
aatgtctcccaaagaagcctgatcattatggatgaacttgggagagcaacttcttcttct
gatggattttccattgcctggagctgctgtgagcatttgttatcactcaaagcaaaaagc
tctgcggcacacaaaatgttaggaggtttctgtttaagaagagttgtgtcagcaaacact
tgcgacagggatgtgcttgaatgtttgacattcttcaggtataccatatttgctactcat
atggagaacctatcggaactagcaaccatctatccgaatgtcaagcttcttcacttagat
gtcactgtaaaaaacaaccgcttagacttcaagtttcaactcaaggatggaccgagacat
gtaccccattatggccttctattggctgaagtggcaggcttaccaagctcagtgattgaa
acagctagaagcatcacatcaaagattaaggaaaaggaaataacacaaatggaagtacac
tgtcaccaataccgacaattacagatgatatatcatgttgctcagcggctaatatgcttg
aagtattccagccaagatgaagattctattcggcaagcactacagaatcttaaagagagc
tacatggatggaaagatctga
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