Ricinus communis (castor bean): 8273039
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Entry
8273039 CDS
T01087
Name
(RefSeq) FACT complex subunit SPT16
KO
K25639
FACT complex subunit SPT16
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8273039
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
8273039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FACT-Spt16_Nlob
SPT16
Peptidase_M24
Rttp106-like_middle
SPT16_C
CBD_PlyG
Motif
Other DBs
NCBI-GeneID:
8273039
NCBI-ProteinID:
XP_002533325
UniProt:
B9T506
LinkDB
All DBs
Position
8:6094852..6098709
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AA seq
1050 aa
AA seq
DB search
MADQRNPSNAYVINTNKFKSRLKLLYSHWNEHKDELWGSADAIAIATPPPSEDLRYLKSS
AMNVWLLGYEFPETIMVFTKKQIHFLCSQKKISLLEVVRAPAKEAADGGIDVVMHVKAKG
DNGSGAMEDIFRAMNVSSVVGYIAKEVPEGALLEMWNQKLMNAGFEQIVDVTNGFADLLA
FKDPDEIISVKKAAFLSCGVMSNVVIPNLENVIDEEKKVSHSSLMDEAEKAIMDPSKAKV
KLRAENCDICYPPIFQSGGDFDLRPSAASNDELLYYDPASVIIVAIGARYNNYCSNVART
FLIDANSMQSKAYEVLLKAHEAAIGALKPGNKFSAAYQAAVTVVKNEAPELVPHMTKSAG
TGIGLEFRESALNLNAKNDRVIKVNMVFNVSLGFQNLQNQTKNPKIQKFSLLLADTVIVG
QTNPDVVTFKTSKAVKDVAYSFNEEDEEVKPQTKAGVNGINTVISKTTLRSDTGDISKEE
MRRQHQAELARQKNEETARRLAGGGGAAGDNRSAVKTSADLIAYKNVNDIPSLRDLMIQI
DQKNETVLLPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIQFVVPGTPFSAHDVNSLKYQ
GSIYLKEVSFRSKDPRHISEVVQQIKTLRRHVVSRESERAERATLVTQEKLQRANNKFKP
IKLHDLWIRPVFGGRGRKLPGVLETHLNGFLFATSRPDEKVEVMFANIKHAFFQPAEREM
ITLLHFHLHNHIMVGNKKTKDVQFYVEVMESVQTLGGGKRSAYDPDEIEEEQRERDRKNK
INMDFQSFVNRVNDLWSQSQFSGLDLEFDQPLRELGFHGVPYKTSSFIVPTSSCLVELIE
TPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTT
DIKYYESKLNLNWRQILKTITDDPQSFIDDGGWEFLNLEASDSDSDNTEDSDKGYEPSDA
EPDSESEDDDSDSESLVESEDEDDEDDSEEDSEEEKGKTWEELEREASNADREKGDDSDS
EEERNRRKAKTLSKSRAPPSSSMAKRSRFR
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccagcgaaaccctagcaatgcttatgtaattaacacgaataagttcaaatca
cggcttaagttactttattcgcattggaatgagcataaagatgagttatggggttcagcg
gatgctattgctatagctactccacctccatccgaggatttaaggtacttgaaatcgtct
gccatgaatgtttggttgttaggatatgagttcccggagacaattatggtttttacgaag
aaacagattcatttcttgtgtagtcagaagaagatttctttgcttgaagttgttagggct
cctgctaaggaggctgctgatggtggaattgatgttgttatgcatgttaaggccaagggt
gataatggttctggtgctatggaagatatatttcgtgctatgaatgtgtctagtgttgtt
gggtatatagccaaggaagttcctgaaggtgcacttttagagatgtggaatcagaaattg
atgaatgctggttttgagcagattgttgatgtgactaatgggtttgctgatttgcttgct
ttcaaggatcctgatgagattattagtgttaagaaagctgcttttttgagttgtggtgtc
atgagcaatgttgttattcctaatctcgagaatgttattgatgaggaaaagaaagtttct
cattcttctttgatggatgaggctgagaaagccattatggatccatccaaagctaaggtg
aagttgagggcggagaattgtgatatttgttaccctccaatatttcagagcggtggtgat
tttgatctcagaccgagtgctgctagcaatgatgagcttctatactatgatcctgctagt
gtaattatagttgccatcggtgctcgatataacaattactgctcaaatgttgccaggaca
ttcttgatagatgccaattctatgcagagcaaggcttatgaggtgcttctcaaagcacat
gaggcagcaattggtgcattgaagcctgggaataaattcagtgctgcatatcaagcagct
gttacagtggttaagaatgaggctcctgagttagttccacacatgacaaaatctgcaggg
acaggcattgggcttgagttccgcgagtctgcgctgaatctcaatgccaagaatgaccgg
gttataaaagtgaatatggtttttaatgtgtccctgggttttcagaacctgcagaatcaa
accaaaaacccaaagatccagaaattttctttgttacttgctgatacagttattgtaggt
caaacaaatccggatgtggtgactttcaagacctccaaagctgttaaggatgtggcttat
tcatttaatgaagaggatgaagaagtaaaaccccaaactaaagctggggttaatggaatt
aatactgtgatttctaagacaacactaaggtccgatactggggatatttcaaaggaggag
atgcggaggcagcaccaggcagaacttgcccgtcaaaagaatgaggaaactgctcggcga
cttgctggtggaggaggtgcagcaggggataatcgatctgctgtgaagacatcagctgat
ttaatagcatacaagaacgtcaatgacattccttctttaagagatctaatgattcagata
gaccagaagaatgaaactgtgcttttacctatttatggaagcatggtgcctttccatgtt
gctacaataaggacagtctccagccaacaggacaccaacaggaattgctatattcgcatt
caatttgtggttccaggaaccccttttagtgcacatgatgtgaattcactgaagtaccag
ggatctatttatctgaaggaggtgtcatttcgttctaaggaccctagacacattagcgaa
gtggtgcagcagattaagacactaaggcggcatgttgtgtctagggagtctgagagagct
gagagggcaaccttggttactcaggagaaacttcagcgtgctaataacaagttcaagcca
ataaagttgcatgatctttggattcgacctgtatttggtggccgtggaagaaagcttccc
ggtgttctggaaactcatctaaatgggttcctatttgcaacaagtagacctgatgagaag
gtggaggtcatgtttgccaacatcaaacacgcatttttccagcctgcagagagggagatg
atcactcttctccacttccatcttcacaatcacattatggtgggaaacaagaagaccaag
gatgtgcagttttatgttgaggtgatggagtcagtccagaccttgggaggtgggaagaga
tctgcttatgaccctgatgaaattgaagaagagcaaagagaaagggacaggaagaataag
atcaacatggatttccagagctttgtgaatagggtgaatgatctttggagccagtcccag
ttcagtggacttgaccttgagtttgatcagcctctgagagagcttggattccatggggta
ccttacaaaacctcatctttcattgttccaacttcaagctgtctcgttgagctaattgag
actcctttccttgttgtcaccctaagtgagatagagattgtgaacttggagagagtgggt
ctaggacagaaaaattttgatatgaccattgtgtttaaggacttcaagcgtgatgttctt
aggattgattctattccatctacatcactggatggcatcaaggaatggcttgacacaaca
gacatcaagtattatgagagcaagttgaatctgaactggcgacagatactgaagacaatc
actgatgatcctcagagtttcatagatgatgggggctgggaatttttgaatttagaagct
agtgattcagattctgataacacagaggattcagataagggttatgagccatcagatgca
gaacctgattctgagtcagaagatgatgactcggacagtgagtcactggtggagtctgag
gatgaggatgatgaggatgattctgaggaagactctgaggaagaaaagggaaagacgtgg
gaggagttggagagagaagcaagcaatgcagacagggagaaaggggatgattctgacagt
gaggaggagaggaatagaaggaaagcaaagactctttcaaagtctcgagctcctcctagt
agcagcatggccaagcgctccaggttcaggtag
DBGET
integrated database retrieval system