Ricinus communis (castor bean): 8274252
Help
Entry
8274252 CDS
T01087
Name
(RefSeq) endoribonuclease Dicer homolog 2
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8274252
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8274252
microRNA pathway
RISC loading complex
8274252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Helicase_C
Dicer_dimer
ResIII
DEAD
PAZ
SNF2-rel_dom
dsrm
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
8274252
NCBI-ProteinID:
XP_015572262
LinkDB
All DBs
Position
7:complement(28992194..29007819)
Genome browser
AA seq
1408 aa
AA seq
DB search
MEPVYMDVDSDQRLASDPLPFARSYQLEALEKAIQQNTIVFLETGSGKTLIAIMLLRSYA
HLLRKPSPFIAVFLVPQVVLVKQQAEAVETHTDLTVGKYWGEMGVDFWDAGSWKQQIEQY
EVLVMTPQILLDGLRHSFFKLDCIKVLIFDECHHARGKHPYACILTEFYHRQLTYRDSAL
PRIFGMTASPIKSKGAKSELAYWTEIRELENIMYSKVYTCASESVLAEFIPFSTPKFKFY
KPMDIPYAIYASLAENLKILKSKYECNLKLLDLTDAVVESTSKRISKMHSTLMYCLDELG
VWLALKAAQILSCHESEFSSCGKLDISGENIVKEFGLNASQALDNCINSAFEHLGPKWSI
GENAEADIEAGLLTTKIFCLIDSLLDYRDIRDLRCIIFVNRVIAAIVLQTLLGELLPRYN
SGWKTQYIAGNNFRLQSQSRKTQNEIVEEFREGKVNIIVATSILEEGLDVQSCNLVVRFD
PSTTVSSFIQSRGRARMQNSDYLLMVKSGDVSTHSRLENYLASGDLMRKESIRHGSVPCS
PIRSEFHEGEYYFVESTNALVTLTSSVSLIYFYCSRLPSDGYFKPTPRCLIDKEMERCTL
LLPKSCSIHTISVEGNVKIIKQKACLEACKQLHKIGALNDNLVPDIVVEETVAQQSGTGN
GPYDDEHPMYFPPELVGQASQKSEAKYYCYLIELNQNFVYEIPVHNFVLAMRSELESDIL
GLDLDLEADRGLLMVKLKYIGEIHLTPETVIMCRKFLITVLKVLVDHSIDKLEDILKGLK
LRNGPEIDYLLLPLVGSCQKPSIDWDAVTSVLFSYENVLEDHKNCPLKEAACVIQTKDGV
VCKCTLQNSVVYTPHNGKVYFIDGTLDHLNGHSLLELRNGYHKSYMEYYKDQHGIKLHFD
QQLLLRGRHIFPLQNYLNRCRQQKEKDSQNAYVELPPELCHIFMSPISISSFYSFTFVPS
IMHRLESLLIASNLKKLHLDHCMQSVAIPTIKVLEAITTKKCQEKFHLESLETLGDSFLK
YAVGQQLFKTYQNHHEGLLSIKKDKLISNATLCRLGCDSKIPGFIRNESFDPKNWLIPDE
ISGCYSLSEEILSNGRKMYIKRRRKLKEKMIADVVEALIGAYLSTGGEIAGLLFLDWIGI
KADFLNMPYERGFEMNPEKYVNICHLESLLKYSFRDPCLLVEALTHGSYMLPEIPRCYQR
LEFLGDSVLDYLITVHLYEKYPGMSPGLLTDMRSASVNNDCYAQSAVREGLHKYILHASQ
KLHKDIVSTVANCKEFSSESTFGWESEISFPKVLGDVIESLAGAIFVDSGYNKEVVFNSI
RPLLEPLITPETIRLHPTRELTELCQKQHFDRRKPVVSHNNGMSCVTVEVEANGVVFKHT
SAAAERKTAKRLASKEVLRALKDSLACK
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgtttacatggacgtagattcagaccaacgacttgcttctgatcctctccca
tttgctagaagttatcaattggaggcattggagaaggcaatacagcagaacacaatagta
ttcttggagactggttctggcaagaccctgatcgcaatcatgcttcttcgcagttatgcc
catcttctccgcaagccatctccatttattgctgtcttcttggttccccaagttgtctta
gtcaaacaacaagctgaagcagtggaaacacacacagacctgactgtgggtaagtactgg
ggagaaatgggtgtcgacttctgggatgctggtagttggaagcaacagatagagcaatac
gaggtacttgtaatgacaccacaaattttgctcgacggcttgaggcatagctttttcaag
ctagactgtataaaggttttgatatttgatgaatgccatcatgcaaggggtaaacaccct
tatgcttgtattttgacagagttctatcaccgccaattaacctacagagatagtgctctt
cctaggatatttgggatgacagcttctcctattaaatcaaagggtgcaaagtcagaacta
gcctactggacggagatccgtgagcttgagaatattatgtattcaaaggtgtatacatgt
gctagcgaatctgtacttgctgagtttataccattttcgactccaaaatttaaattctac
aaacccatggacataccatatgctatatatgcaagcttagctgaaaatttgaagatactg
aaatcaaagtatgaatgcaacttgaagctattagatctcactgatgctgtggtggaatct
acaagcaagagaatatcaaaaatgcattctactttgatgtattgtttggatgaacttggt
gtctggttggctcttaaggctgcacagatcttgtcatgccatgaaagtgagttttcttca
tgtggtaaattggacatctctggtgagaatattgtcaaggagttcggtttgaatgcctca
caagcacttgataattgcatcaacagcgcctttgaacatctaggcccaaaatggtctatc
ggcgaaaatgctgaagctgatattgaagcaggtcttttgactaccaaaatattttgcctc
atcgactcacttctagactacagagatataagggatcttagatgtataatttttgtgaat
agagtcatcgcagccattgtccttcagactcttctgggtgagttacttccaagatataat
agtggctggaagactcaatatatagcaggaaataacttcaggttgcaatcccagtcacgg
aaaacacagaatgaaatcgtggaagaatttcgtgaaggcaaggttaacataattgtggcc
acatccattcttgaggaaggtttagatgtgcaaagttgcaacctggtagttagatttgat
ccttctactacagttagtagtttcatacaatcccgaggtcgtgcaaggatgcagaattca
gactatttgttaatggttaagagtggagatgtttctactcattctcggctagagaactat
ctagctagtggagatctaatgagaaaggagtccatacgtcatggttctgttccgtgttca
cctattaggagtgagttccatgaaggcgaatattattttgttgaaagcactaatgccttg
gtgactcttacttcaagtgttagtttgatatacttctattgctcacgtctgccatctgac
gggtattttaaacccactcctaggtgtcttatagacaaggagatggagagatgcaccttg
cttctccccaagagctgctctatacataccattagtgtagagggaaatgttaaaattata
aagcagaaggcatgccttgaagcatgcaagcagctccacaaaattggtgctttaaatgat
aatcttgtacctgatattgttgtagaggagactgttgctcaacaatccggcacagggaat
ggaccctatgatgatgaacatcctatgtacttcccacctgagctggttggtcaagcttcg
caaaagtcagaagcaaagtactattgctatttgattgaattaaaccagaactttgtttat
gagattcctgtgcataactttgtgcttgcaatgaggagtgaactagaatcggatattcta
ggtctggatttagacttagaagctgatagagggttattgatggttaaattgaagtatatt
ggggagattcatcttacgcctgaaactgtcattatgtgtaggaagtttcttatcactgtt
cttaaagttctagtggatcatagtatcgataaattggaggacattttaaaaggattgaag
ctcaggaatggccctgagattgattatcttctgcttccattagtgggctcatgccagaaa
ccttccattgactgggatgcagttacatctgtgctcttctcatatgaaaatgtactggag
gatcataagaactgccctctaaaggaagctgcatgtgttattcagacaaaagatggtgtg
gtatgcaaatgcacacttcagaattctgtagtctacacaccacataatggaaaagtctat
tttattgatggcacattagatcatctgaatggacactcgcttttggagctccggaatgga
tatcataaaagttacatggagtactataaagatcagcatggcattaaactgcattttgat
caacagttactccttagggggcgacatatttttcctttgcagaattaccttaatagatgc
agacagcagaaggagaaagattcacaaaatgcatatgtcgagttgcctcctgagctttgc
cacattttcatgtcaccaatatccattagttccttctattcatttacatttgttccatca
atcatgcatcggcttgagtcattacttattgctagcaacttgaagaagttgcatttggat
cattgcatgcaaagtgttgctatcccaaccatcaaggttttggaagcaattaccacaaaa
aagtgccaagaaaaatttcatttggaatcattagagactcttggagattcttttcttaaa
tatgctgttgggcagcagctattcaaaacctatcaaaatcatcatgagggccttctcagt
attaagaaggacaagcttattagtaatgctacactttgcagactaggatgtgactccaaa
atcccgggattcatacgcaacgagtcttttgatcctaaaaattggctgattcctgatgaa
atttctggatgctactcattaagtgaggagattctctctaatggaagaaaaatgtacata
aaaagaagaagaaagttaaaggaaaagatgattgctgatgttgtcgaggcactgattggt
gcttaccttagcactggtggagaaatagcaggattacttttcttggattggattggtata
aaagcagattttctaaatatgccatatgaacggggatttgaaatgaatccagagaagtat
gttaatatctgtcatttagagtcactattgaagtactcatttagggatccttgtctgcta
gtggaagcattgactcatggttcctacatgcttcctgaaattccaagatgttatcagcgg
ttggaatttcttggagactccgtgttagactaccttataacagtgcacttgtatgaaaaa
tatcctgggatgtcaccaggactgttgactgacatgagatctgcttctgtgaacaatgat
tgttatgcacaatctgctgtcagggaaggactgcataaatatatcctccacgcctcacaa
aaacttcacaaggatatagtctccacagttgcaaattgtaaggaattttcttcagaatca
acttttggatgggaatctgagatatcattccccaaggtacttggggatgtgatagaatca
ctggctggggctatatttgttgattctgggtacaacaaagaggttgtatttaacagcata
aggccacttttggagccactgattactccagagaccattaggcttcacccaacaagggag
cttactgaattatgtcaaaagcaacattttgataggagaaagcctgttgtttctcacaac
aatggtatgtcatgcgtaactgtagaggttgaagcaaatggtgttgtatttaagcacaca
tctgcagctgcagagaggaaaacagctaaaagactagcttccaaagaggttttgagggct
ttgaaggatagcttagcttgcaaatag
DBGET
integrated database retrieval system
