Ricinus communis (castor bean): 8278001
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Entry
8278001 CDS
T01087
Name
(RefSeq) protein transport protein Sec24-like At4g32640 isoform X1
KO
K14007
protein transport protein SEC24
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8278001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8278001
Membrane trafficking [BR:
rcu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
8278001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
8278001
NCBI-ProteinID:
XP_015571531
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All DBs
Position
2:complement(7057001..7073393)
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AA seq
1095 aa
AA seq
DB search
MASPMPREPPTRPGYNNNTNNEQTPPPPLPPNYILNANSLAEYVHSLNLNQPTAMPNSGP
SCPPFVQLPPFPQTGAAPIASHPMSRPGPPPGALARPAVLPSPSPPSPTLPPNVAPGRPA
GPTVVNLPPSTSGSRLPPPGSLSMGGPAIAPPPGSSPSALSTGLTAVPPPGARPSPFASS
PPFSVRPAVAPSIHPKSNGPPFASGPRFPPAGNATQPVMGPQLPTGLARGPPQPPSMGSF
LGSTAVGVPPALSMQPLSQFTAGSLEFSSPPGPPSGAQSWTIQPQLVAPTPQVPGSVQPP
GMFGMAPPLPHQSMTTISPAMGQTGSSLAGPSKIDPSQIPRPIPSSTIIVHETRQGNQAN
PPPPATSEYMVRDTGNCSPRYMRCTINQIPCTVDLLNTSGMQLALLVQPLALLPPSEEPI
QVVDFGESGPVRCSRCKGYINPFMRFIDQGRRFICNLCGFTDETPRDYHCNLGPDGRRRD
ADERPELCRGAVEFVATKEYMVREPMPAVYFFLIDVSINAIQTGAVAAACIAISRVISDL
PEGPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDIEDVYTPLHSDVIVQLSECRQHLE
ILLETIPSMFQSNKTSDSAFGAAIKAAFLAMKSTGGKLLVFQSVLPSLGIGSLSSREAEG
RTNISSGEKEAHTLLQPADKTFKTMAIELAESQVCVDVFLTTQTYVDITSISVIPRTTGG
QVYYYYPFSALSDPAKLYNDLRWNITRSQGFEAVMRVRCSQGIQVQEYSGNFCKRVPTDI
DLPGIDCDKTIMITLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVITLSLPCTNMLSNL
FRTADLDTQFACLLKQVASRIRSSPVVIVREQVTELCINILLSYRKFCATVSSTGQLILP
EALKLLPLYNLALMKSTGLRTDGRIDDRSFWINYVLSLSAPLAIPLVYPRMVAIHDPSST
EDGESLLPTSIALSSEHIKDEGIYLLENGEDALLYVGNLVGSDIVQQIFGISSVDEISVQ
FVLQQYDNPLSKKLNNIINEMRRQRCSYLRLKLCKKEDPSGGMFNSYMVEDKNASGPSYI
EFLVHVHRQIQIKMS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcctatgcctagagagccacctactaggcctggttataataataataccaat
aatgaacaaacaccaccaccaccgctacctcctaattacattctcaatgctaattcttta
gctgaatatgtgcatagtttgaatttgaatcaacctactgccatgcctaattccggtcct
agttgtccaccttttgttcaactgccgccttttccacaaactggagccgcacctattgct
tcccatccaatgtctcgccctggccctccacctggtgcattggcaagacctgcagtgctt
ccctcaccatccccaccatcacctacattgcctccgaatgttgctcctggaaggcctgct
ggtcctactgttgttaatctgccaccttctacttctggatctaggttgccacctccaggg
tctttgtccatgggtggtccagccattgctcctcctcctgggtcatcaccttctgctttg
tctactggtctgactgctgtgccaccaccaggtgctcgtccaagtccttttgcttcatct
ccaccttttagtgttcgtccagctgtcgctccttctattcatccaaagagtaatggaccg
ccattcgcttctggacccagatttcctccagctggtaatgccacacagccagtcatggga
cctcagctgccaacaggtttagctcgtggtcctcctcagcctccaagtatgggatctttt
ctaggaagtactgctgttggtgttccaccagcactttctatgcaaccactatcccagttt
actgctggatccctggagttttcatctcctccaggccctccctcaggagcacagtcatgg
acaatacaaccccaactggttgctccaactccacaggtgcctggttctgtgcagccacct
ggaatgtttggaatggctccaccactgccacatcaatctatgactaccatatcacctgca
atgggtcaaactggatcctctctggcagggccatcaaagattgatcccagtcaaattcca
agacccattccaagttccacaattatagtgcatgaaacacgtcaaggaaatcaggctaac
cctcctccgcctgctacaagtgagtatatggtcagagacactggtaattgcagtccacga
tacatgaggtgtaccatcaatcagatcccttgcactgttgaccttttgaacacgtcgggt
atgcaattggctttgttggtccaacctttggctcttcttcctccatctgaggagcccatc
caagttgtggactttggggaaagtggtccggttcggtgttcacgttgcaaaggttacata
aatcctttcatgaggttcattgatcagggaaggcggtttatctgcaatttatgtgggttt
accgatgagactccccgtgactatcactgcaatctaggtccagatggtaggcgtagagat
gctgatgaaaggcctgaattatgtcgaggagcagttgaatttgttgctaccaaggaatac
atggtgcgtgaaccaatgccagctgtgtattttttcctcatcgatgtatccataaatgcc
attcagactggcgcagtagctgcagcttgcattgcaatcagtcgagttatttctgatctt
ccagaaggtcctcggacaatggtggggattgcaacatttgactcaacaatccatttttac
aatttaaaacgtgcattacagcagccattgatgctcattgtacctgatattgaagatgtt
tacacccctctacatagtgatgtaattgttcagctttctgagtgtcgccaacatttggaa
atattgctagaaaccatcccatccatgtttcagagtaataaaacttctgattcagccttt
ggtgcagcaatcaaggcagctttcttggcaatgaagagtactggagggaagcttctggta
tttcagtcagtcttgccatcccttggcattggatccctttcctctagggaggctgaaggg
agaaccaacatctcatcaggggagaaggaggcccacacattgttgcaaccagcagataaa
acttttaaaactatggcaatagagcttgctgagtctcaggtttgtgttgatgtcttcctc
acaactcaaacttatgtggacattacttccatctctgtcattccaagaactactggtggg
caggtttattactattaccccttttcagctctttctgatcctgccaagctttacaatgat
ctcagatggaatatcaccaggtcacaaggttttgaggctgtcatgcgtgtaagatgcagt
cagggtattcaagtacaagagtactctggaaacttctgcaaacgcgttccaactgacatt
gacctacctgggattgactgtgacaaaaccataatgataactttgaagcatgacgataaa
ttgcaggatggctcagaatgtgcttttcagtgtgcccttctttacaccactgtttatggc
cagagaagaattcgtgtcataactttgtcattgccatgtacgaacatgctcagtaatttg
tttcgtacagctgatttggatacccaatttgcatgtttgttgaagcaagtggcaagtaga
attcgttccagcccagtagtaattgtcagggagcaagtgacggagctgtgcatcaacatt
ctgctttcatatcgtaaattttgtgccactgtatcatcaactggacaacttattcttccg
gaggcacttaagctgttgcctttatataaccttgcattaatgaaaagtacaggattgcgt
accgatgggagaatagatgatcgatctttctggattaattatgttttatccctttctgct
ccattggcaattccacttgtgtaccccaggatggtggctattcatgatcctagttcaacg
gaagatggagaatctcttcttcctacttccatagctctttccagtgaacacatcaaagat
gaaggaatctatcttcttgagaatggtgaagatgctttgctttatgttgggaacttggtg
ggttctgatatcgtgcaacagattttcggcatatcctcagtggatgaaatctctgtgcag
tttgtgctgcagcaatatgataatccgttatcaaagaagctaaacaatataataaatgag
atgcggcgtcaaagatgttcttatctccgcttgaaactatgcaagaaagaagatccatca
ggtggaatgttcaattcatatatggtagaagacaagaacgccagtggcccctcttacatt
gaatttcttgttcatgtgcatcggcagatccaaattaagatgtcataa
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