KEGG   Ricinus communis (castor bean): 8284145
Entry
8284145           CDS       T01087                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03020  RNA polymerase
rcu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8284145
  09124 Replication and repair
   03420 Nucleotide excision repair
    8284145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcu03021]
    8284145
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8284145
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8284145
Transcription machinery [BR:rcu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     8284145
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     8284145
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      8284145
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 8284145
NCBI-ProteinID: XP_002520498
UniProt: B9S3C9
LinkDB
Position
1:complement(35873394..35876823)
AA seq 176 aa
MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgtttttccacattgtattagagaggaacatgcaattgcaccctcgctactttggccgc
aatctccgtgaaaatcttgtatctaagcttatgaaagatgttgagggcacttgcagtggt
cgacatggatttgtggtggcaataacgggcatagagagcgttgggaaagggttgatccga
gatggaacaggatttgtgacatttccagtgaagtaccagtgtgttgtgtttaggccattt
aagggagagattttggaagctgttgttaccatggtaaacaagatgggattttttgcagaa
gctggaccagttcaaatttttgtttcaaaccatttgatacctgatgatatggagttccag
tctggagacatgccaaactatacaacttcagatggatcagttaaaattcagaaggatagt
gaagtgcgacttaagataattggtactcgagttgatgccacagaaattttttgcatcggt
accataaaggatgatttcttgggcgtgataaatgatcctgcaactgcttaa

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