Ricinus communis (castor bean): 8284198
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Entry
8284198 CDS
T01087
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4 isoform X1
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8284198
Enzymes [BR:
rcu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
8284198
Transfer RNA biogenesis [BR:
rcu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
8284198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_5
Kelch_2
MTS
Cons_hypoth95
DNA_methylase
TRM
PrmA
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
8284198
NCBI-ProteinID:
XP_015574248
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Position
5:complement(31475760..31482429)
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AA seq
1037 aa
AA seq
DB search
MEFLKRKEATLSSLKTDKSPKGTIDTPIIPLLNSLNSHHSYFTTSSCSGRISILAQPKPI
PTHLTPNKKKARGGSWLFISHDPAKSDSVLSLLFPCKSVTESSDLVFRFEPLIIAVECLD
IESAQFLVSLAISSGFRESGITSANKKRVIVGIRCSIRMEVPLGDTDDVLVSPEYVRFLV
EIANEKMEANRNRTQGFLSALVENGFVGPTRSFSENGDLDNDGDDDIQDEDLVLERANGG
AQTVFESLTGRVGVSGFTLSNGQMVISGEPLEKLFLWGHSACVLDNNKSKNILVFGGFGG
MGRHARRNDTLLLDPINGTLKTIDAVGAPSPRLGHTASLVGDLLFVIGGRSGPLDILGDV
WILNTASKEWRLAECTGSYFSPRHRHAAAVVGSSIYVYGGLDNETSSSSLYVLNTESLQW
KEVLVGGEQPCARHSHSMVAYGSKLFMFGGYNGEKALGDLYSFDIQTHMWKKENTSGGSP
HPRFSHSLFVYNHFLGLIGGCPVRQNSQELSLLNLQNCKWNHVAIDYIGKELLVRSTANV
VGDELVMIGGGAACYAFGTKFSEPLKISLLPLMSLEDKTMPLQFGEKHGTDQYNGVSGEN
NDNIRGSQVGNAEPATYNYSFNLQAEQSQLATSHWILQLEKKYAKLGKDMLKKFHWLDLT
RKVHSQKDGLHVCFPITEKFYEVFSKRQHKCGDVAEGQNKNRGEMVLLNEVSCSTTLNLL
KHYGATLLADEIVEARRTSKSPLQLMKEAVASLIKHKGLSTELLEQLPTRWERLGNIVVL
PVTSFKDPSWDLIGEELWPAIARSLNSQRLARNGRVAPTGTRDSTLEMLVGDNGWVDHRE
NGILYSFDVTKCMFSWGNLSEKIRMAHLDCKDEVIVDLFAGIGYFVLPFLVRANAKLVYA
CEWNPHAVEALKRNLEANSVSDQCVVLEGDNRLIAPRGVADRVCLGLLPSSEGSWVTAVR
ALRSEGGVLHVHGNVKDSEEGSWTEHVMRSIDEIARSEAGHCWEVSIEHVERVKWYAPHI
RHLVADVRCRQILKDNS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggagtttctaaagagaaaagaagcaactttatcttcattaaaaacagacaaatcacca
aaaggaacaatagacacacccattatcccacttctcaattctctcaattcccatcattct
tacttcactaccagttcttgctcgggtcgaatctcaattctcgcccaacccaaacccata
ccaacccacctaacacccaataaaaagaaggcacgtggtgggtcctggctatttatatct
catgatccagcaaaatccgactccgttctctctctccttttcccttgtaagtcagtgact
gaatcatctgatttggtgtttcggttcgaaccgttgattatcgcggttgaatgtttagac
attgaatctgcacagtttttagtttctctagctatatcatctgggtttagagaatcaggg
attactagtgccaataagaagagagttattgtgggtattaggtgttccataagaatggaa
gtgccacttggtgatactgatgatgttctcgtgtcgcctgaatatgttagatttcttgtg
gagattgctaatgagaaaatggaagctaatagaaatagaactcaaggttttttaagtgct
ttagttgaaaatgggtttgtagggcccaccaggtcgttttcggagaatggtgatcttgat
aatgacggtgatgatgatattcaagatgaggacttggtgttagagagagcaaatgggggt
gcccaaactgtctttgaatccttgacaggacgagtaggagtatctggtttcactttatct
aatggtcaaatggtaatttctggtgaacctttggaaaaacttttcctttggggtcactct
gcttgcgtattggataataataagagcaagaatattcttgtatttggtggttttggaggc
atgggaagacatgcacggagaaatgatactttgctgcttgatcccataaatggcacgtta
aagacaattgatgcagtgggtgcaccatctccacgattgggtcatacagcttctttggtt
ggtgacttattatttgttattggaggcaggtctggtcccttggacattctgggtgatgta
tggattctaaatactgccagtaaggaatggaggttagcagagtgcactggcagttatttc
tctcctaggcatcggcacgcagctgcagttgttggctcaagcatatatgtatatggtggt
cttgacaatgagacaagttcttcatccttgtatgttttgaacactgaaagcctgcagtgg
aaagaggtattggttggtggggaacagccatgtgcccgtcattctcactcaatggtggca
tacgggtctaagttgttcatgtttggagggtacaatggagagaaagctctgggagattta
tacagttttgacattcaaacacatatgtggaaaaaagaaaatacatctggtggaagccca
catccaagattctcccactcattgtttgtctataatcattttctcggacttattgggggc
tgtcccgtcagacaaaattcccaagagttgtcattactcaatctacaaaactgtaaatgg
aatcatgtggcaattgattatatcggcaaggaattgcttgtacgcagtacagccaatgtt
gtgggtgatgaacttgtgatgattggcggtggggcagcttgctatgcctttggaacaaag
ttcagtgagccactaaaaatcagcttgcttccattgatgtctttagaagacaaaactatg
ccattacaatttggagaaaaacatgggactgatcagtataacggagtaagtggagaaaat
aatgataacattcgaggttcccaagttggaaatgctgaacctgcaacttataattatagc
tttaatttgcaggctgagcagagtcagttggctacttcgcattggatactacaacttgaa
aagaagtatgcaaaattagggaaggacatgctgaagaaatttcattggttagatctcacg
aggaaggttcattctcaaaaggatggattgcatgtttgtttccctatcactgaaaaattc
tatgaagtgttctccaaaaggcagcataagtgtggagatgtagctgaagggcagaataaa
aatagaggtgaaatggttttattaaatgaggtctcatgctcaacaaccttgaatctcttg
aagcactatggtgccactctgctggcagatgagattgttgaagctagaagaacctctaaa
tcaccattgcagttgatgaaagaagcggtagcctctttgatcaaacataaaggcctatca
acagaattattagagcagctaccaactaggtgggagcgcctcgggaatattgttgtactt
ccagtaacatcgttcaaggatccatcttgggacttaattggggaggagctctggcctgct
attgctagatcccttaactctcagcgtctagctcggaatggccgagttgcaccaactgga
acaagggatagtactttagagatgctggtgggagataatggctgggttgatcaccgagaa
aatgggattctctattcttttgatgttaccaagtgcatgttttcctggggtaatctttct
gagaagattcgcatggcccatttggactgtaaagatgaggttatagtggatttatttgct
ggaattggatattttgtactgccatttcttgttagggccaatgcgaaactggtttatgct
tgtgaatggaatccccatgctgttgaggctctcaaacgcaatcttgaagcaaattctgtt
tctgatcagtgtgttgtacttgaaggcgataatcgattgattgctcctagaggagttgct
gatcgggtttgtcttggtcttcttccatcaagtgagggcagttgggtaactgctgttaga
gcgttaaggagtgaggggggggtgctgcatgtgcatgggaatgtgaaggactcagaggag
ggctcatggactgaacatgttatgagatcaatagatgaaattgcaagatcagaagcaggt
cattgttgggaggtctcgatagaacatgtggagagggtaaaatggtatgccccacatata
cgccaccttgtagcagacgttaggtgcagacagattctaaaagataacagttga
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