Ricinus communis (castor bean): 8289820
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Entry
8289820 CDS
T01087
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8289820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8289820
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8289820
Enzymes [BR:
rcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
8289820
Messenger RNA biogenesis [BR:
rcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
8289820
Transfer RNA biogenesis [BR:
rcu03016
]
Prokaryotic type
tRNA degradation factors
8289820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
Urease_gamma
KH_1
Motif
Other DBs
NCBI-GeneID:
8289820
NCBI-ProteinID:
XP_002524669
UniProt:
B9SFA0
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All DBs
Position
5:complement(30538250..30549109)
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AA seq
958 aa
AA seq
DB search
MSAIARSKANPLVNSLPRFLTRRSFNFRTICSGRLGFAPSYPDRPVAGTKVLETFKEEFE
IGSQVISLETGEIARFANGAVVLSMDQTKVLSTVTSSKGDAVRDFLPLTVDYQEKQFAQG
VIPNTFMRREGAPKERELLCGRLIDRPIRPLFAPGFYHEVQVMASVLSSDGKQDPDVMAA
NATSAALMLSDIPWGGPIGVIRIGRIGGQFIVNPTMDELSLSDLNLVYACTKDKTLMIDV
QAREISEKDLEAALRLAHPEAVKYLEPQIRLAAKAGKDKKDYKLSMVSERILEKVRNLAE
TQIEAVFTDSSYGKFERGEALDNITQDVKRTLEEECDEESLNVLRKAVDTVRKQVVRRRI
ISEGFRVDGRRLDEVRPLFCKAGPLPILHGSSLFNRGDTQVLCTVTLGAPGDAQRLESLV
GPPTKRFMLHYSFPPFSINEVGKRVGLNRREVGHGTLAEKALLAVLPPEDDFPYTVRINS
EVMASDGSTSMATVCGGSMALMDAGIPLREHVAGVSVGLVSEVDPSTGEIKDYRVLTDIL
GLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIICECLDHALKGRLQILDHMEQEIN
VPRTQVDKTRPRLATFKFSNDTLRQLIGPLGVLKRKIEEETGARLSISDGMLTVGAKNQA
VMDKVQEKIDFIIGCEIETGGVYKGIVTSIKEYGAFIQFNGGQQGLLHISELSHEPVSKV
SDVVSVGQQLSLMCIGQDVRGNIKLSLKATSPPLGSNTNIMEEGSVPVTKELPKVWASVE
NVSDGRDEQKPTAEFPLDSSMVNFSTSSAPAFLIRSIAECDEEEKDASLNRDSNNAPKIL
WTAKRDHKLKTNPPKYDSHSPVPNSNSLSHTKNKLNNVENEVESPINARNLKLGTKVAAK
VYQIRKHGLVLDLGGEVRGMFRFEENGKRDFEVGDELRVKCTNFSSKGIPVMSLVDDE
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaatagcaagaagcaaagccaatccacttgtcaattctctccctcgcttcctg
acgcggcgatcttttaacttccgcaccatctgcagcggtcgtctcggcttcgctccttcc
tatccggaccgtcctgtcgccggcactaaagtcttagagaccttcaaagaagaatttgag
atcggttcacaagttatttctcttgaaacaggggaaattgcccggtttgctaatggcgct
gtcgtcttgagcatggatcaaactaaagttctttctactgtaacttcctctaaaggcgac
gctgttcgtgattttttacctctcactgttgattaccaagagaagcaatttgcgcaaggt
gtaattcctaatacatttatgcgaagagaaggtgctccaaaagagcgcgagcttttatgt
ggtcgtctcattgaccgacctatacgacctctctttgcacctggattttaccatgaagtt
caggtaatggcgagtgttctatcttcggatggcaaacaagatccagatgtaatggcagct
aatgcaacatctgctgctcttatgttgtcagatattccttggggtggacccattggggtg
atacgcataggaaggatcggtggccaatttatcgttaatccaaccatggatgagcttagc
ttaagtgatctgaacttagtatacgcctgtacaaaggacaaaaccttaatgatagatgta
caagctcgagaaatatcagaaaaagatctggaagcggcgttaagattggcgcatccagag
gcagttaaatatcttgaacctcaaattagacttgctgccaaggctgggaaagataagaag
gactataaactatctatggtgtctgaaagaatattagagaaagtcagaaacttagcagaa
acacaaattgaagctgttttcactgactcctcatatggcaagtttgaacgtggggaggct
ttagataacattacacaagatgtaaaaagaacacttgaagaggaatgtgatgaagagagc
ttaaatgttctacggaaggcagtagacacagtgaggaaacaggttgtccgcaggaggatt
atttctgaaggatttagagttgatggaagacgtcttgatgaagtcaggccattgttttgt
aaggctggtcctttgcctatattgcatggatcttcactttttaatcgtggagatactcag
gtcctttgtactgtgacacttggagctcctggagatgctcagcgcttggaatccttggtt
ggaccccctacaaagcgcttcatgcttcactacagttttccaccattttcaattaatgaa
gttggtaaacgagttggcctgaacaggcgtgaagttgggcatggaactcttgcggagaag
gcactacttgctgttctgcctcctgaagatgattttccatatactgtccgtatcaattca
gaagtcatggcatctgatggttcaacatcaatggcaactgtttgtggaggtagcatggct
ttgatggatgctggcattccattaagagaacatgtagctggtgtctctgtggggctggtt
agtgaagttgacccgtcgactggtgaaattaaggactatcgagtattgactgatattttg
ggcctggaagatcatttaggggacatggactttaaaattgctggaacacgtaatggagtt
actgcaattcaattggatattaaacctgctggaattcctttagatatcatttgtgagtgt
ttggatcatgctcttaagggtcgtcttcaaatccttgaccacatggaacaagagattaat
gtgccacgtactcaagttgataagactcgccctcgactagctacctttaaattcagcaat
gatactcttcgtcagctaatcggccctcttggcgtccttaagagaaaaattgaagaggaa
acaggtgcacgattgtctattagtgatggcatgcttactgtaggtgctaagaatcaggcc
gtaatggataaagtacaagaaaagattgatttcataattggctgtgaaattgaaactggt
ggagtttacaaaggcattgtaacatcaataaaagagtatggtgcttttattcaatttaat
ggtggccagcaaggtctgctgcatatttctgagttatcacatgaaccggtctccaaggtt
tcagatgtagtatctgttggccagcagctttctttgatgtgcattgggcaggatgttcgt
ggtaacattaaattatctcttaaagcaacttcacccccgctaggatccaacacaaatatt
atggaggaaggatctgttcctgtcacgaaagaattgcccaaggtttgggcatcagttgag
aatgtgtctgatggacgagatgagcagaaacctactgcagagtttcctctggatagcagt
atggtaaatttttcaacttcatctgcaccagcatttctaattcgaagtattgcagagtgt
gatgaggaggaaaaagatgccagtctgaatcgagattccaataatgcacctaaaattctc
tggactgcgaaacgagatcataagctgaaaacaaaccctcctaaatatgactctcattca
ccagtcccaaattccaatagcctttcacatactaagaataagttgaataatgtggaaaat
gaagttgagagtcctattaatgcgagaaatttgaaacttgggacaaaggttgctgccaaa
gtctatcaaattcgcaagcatggattggtccttgatttgggtggtgaagttcgtggaatg
tttcgctttgaggaaaatggcaagagggactttgaggtaggtgatgagctgcgagtcaag
tgcacaaacttttccagcaaggggattccagttatgtctttggtggatgatgagtag
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