Pseudoroseomonas cervicalis: PFY06_06925
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Entry
PFY06_06925 CDS
T08750
Name
(GenBank) lytic transglycosylase domain-containing protein
Organism
rcv
Pseudoroseomonas cervicalis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_8
TPR_16
TPR_2
TPR_4
Motif
Other DBs
NCBI-ProteinID:
WBV44283
LinkDB
All DBs
Position
complement(1439765..1441822)
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AA seq
685 aa
AA seq
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MCAALLPPRHAAGPRPRRVRPGLPGLATALALTLAATWPAAAQPWASDAARAQGRAAMAA
LQASRWSEAEAIARQGADPLAAKLVTWVRLQVRGQASAEEIAAFTAANPDWPLPTTLTLR
GEEALPVLADDALVLRLFARTPPRGLPARRLLAEALARQGDTAGAARAAREGWREAGADP
VSEPTYLAAFAGVLTAEDHRARFERLAWTRQGAAAARMLPLLPPEARLNAELRLALAGDQ
PGAEAGAAPRAAQDLGLAMELARFLRRQERDREAAAVWQRAEPLQRELSPEAARAIWTER
QVLSRKLLRLGDTDNAYRTAAAHGQTGGEGLHEAEFWAGFIALRRLSDAPRAARHFATLG
EGSSSIITQARAHYWRGRAAAGLGRAEEARAHFTAAAGFPNAFYGQLAALALGESAPQLA
QRILSTRPPQPSAEAASAFLDKELARAVLTLADLGDTGRARAFLLRLEEIAASPAEQLLT
ARLAHAIGRPDHAVWVARRGGIDGVMMLPEGYPTPYTLPEGAEIEPAFAYAVTRQESNFD
PAAVSPANARGLMQLLPSTATLVARQLGIPHQLGWLTSQPEHNMRLGARYLADQLARFGN
LAMAAAAYNAGPRRVEEWLVTYGDPRVPGESGGADMIDWMEQIPFTETRNYAQRVVENAV
VYRALSGQGGLDHPLKPWLPVGTVR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgccgccctgcttccgccccgccatgccgccggcccccgcccgcggcgcgtccgc
cctggcctgcccggccttgccaccgccctggccctgaccctggccgccacctggcccgcc
gccgcccagccctgggcgagcgacgcggcgcgcgcccagggtcgcgccgccatggcggcg
ctgcaggccagccgctggagcgaggccgaggcgatcgcccgccagggcgccgacccgctg
gccgccaagctggtgacctgggtgcggctgcaggtgcgcggccaggccagcgccgaggag
atcgccgccttcaccgccgccaatcccgactggccgctgccgaccacgctgacgctgcgc
ggcgaggaggcgctgccggtgctggccgatgatgcgctggtgctgcggctgttcgcccgc
accccgccgcgcggcctgccggcccgccgcctgctggccgaggcgctggcccgccagggc
gacaccgccggcgccgcccgcgccgcgcgcgagggctggcgcgaggccggggccgacccg
gtctccgaacccacctatctggccgccttcgccggcgtgctgaccgccgaggaccaccgc
gcccgcttcgagcgtctggcctggacccggcagggcgcggccgcggcgcgcatgctgccg
ctgctgccgcccgaggcgcggctgaatgccgagctgcgcctggcgctggccggcgaccag
cccggcgccgaggccggtgcggcgccgcgcgccgcgcaggatctgggcctggcgatggag
ctggcgcgcttcctgcgccggcaggagcgcgaccgcgaggccgccgcggtgtggcagcgc
gccgagcccttgcagcgcgagctctcgcccgaggcggcgcgcgccatctggaccgagcgg
caggtgctgtcgcgcaagctgctgcggctgggcgacaccgacaatgcctatcgcaccgcc
gcggcgcatggccagaccggtggcgaggggctgcacgaggccgagttctgggccggcttc
atcgcgctgcgccggctgagcgacgcgccgcgcgcggcgcggcatttcgccacgctgggc
gagggcagctccagcatcatcacccaggcgcgggcgcattactggcgcggccgcgccgcc
gccggccttggccgggcggaggaggcgcgcgcccatttcaccgccgccgccggcttcccc
aacgccttctatggccagctcgccgcgctcgccctgggcgagagcgcgccccagctggcg
cagcgcatcctgtcgacccgcccgccgcagcccagcgccgaggcggcctccgccttcctc
gacaaggagctggcgcgggcggtgctgacgctggccgatctcggcgacaccggccgggcg
cgggccttcctgctgcggctggaggagatcgcggcgagcccggccgagcagctgctgacg
gcgcggctggcgcatgcgatcggccggcccgaccatgcggtgtgggtcgcccggcgcggc
ggcatcgacggggtgatgatgctgcccgagggctatccgaccccctacaccctgcccgag
ggcgccgagatcgagcccgccttcgcctatgcggtgacgcggcaggagagcaatttcgat
cccgccgccgtgtcgcccgccaatgcgcgcgggctgatgcagctgctgccctcgaccgcc
acgctggtggcgcggcagcttggcattccgcaccagctggggtggctgaccagccagccg
gagcacaatatgcggctcggcgcgcgctatctggccgaccagctggcgcgcttcggcaac
ctcgccatggcggcggccgcctacaatgccgggccgcgccgggtcgaggaatggctggtc
acctatggcgatccgcgcgtgccgggcgaatccggcggtgccgacatgatcgactggatg
gagcagatccccttcaccgagacccgcaactacgcccagcgcgtggtggagaatgcggtg
gtctaccgggcgctgtccggccagggcgggctcgaccatccgctgaagccctggctgccg
gtggggacggtgcgctga
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