Roseobacter denitrificans: RD1_0616
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Entry
RD1_0616 CDS
T00376
Symbol
leuC
Name
(GenBank) 3-isopropylmalate dehydratase, large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00290
Valine, leucine and isoleucine biosynthesis
rde00660
C5-Branched dibasic acid metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01210
2-Oxocarboxylic acid metabolism
rde01230
Biosynthesis of amino acids
Module
rde_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
RD1_0616 (leuC)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
RD1_0616 (leuC)
Enzymes [BR:
rde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
RD1_0616 (leuC)
4.2.1.35 (R)-2-methylmalate dehydratase
RD1_0616 (leuC)
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Gene cluster
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Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
ABG30316
RoseoBase:
RD1_0616
UniProt:
Q16CH7
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All DBs
Position
complement(598888..600294)
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AA seq
468 aa
AA seq
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MSPKTLYDKIWDAHVAHEADDGTTLLYIDRHLVHEVTSPQAFEGLRMTGRTVRAPDKTIA
VPDHNVPTTLGREKADNMTEDSRIQVAALDTNAKEFGIHYYPVSDIRQGIVHIVGPEQGW
TLPGMTVVCGDSHTATHGAFGALAHGIGTSEVEHVLATQTLIQKKSKNMKVEITGKLRPG
VTAKDITLSVIGHTGTAGGTGYVIEYCGEAIRDLSMEGRMTVCNMAIEGGARAGLIAPDE
KTFEYCMGRPHAPKGAQWEAAMSWWKTLYSDDDAHWDKVITIKGDDIAPVVTWGTSPEDV
LPITASVPKPEDFTGGKVGAVQRSLEYMGLTSGTPLSEVEIDTVFIGSCTNGRIEDLRAA
AEILKGKKKKDGLRAMVVPGSGLVRAQAEEEGLADIFKEAGFEWRLAGCSMCLAMNPDQL
QPGERCAATSNRNFEGRQGRGGRTHLMSPAMAAAAAITGRLTDVRDLM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccaagacactttacgataaaatctgggatgcccatgtggcacatgaagccgat
gacggcacgaccctgctgtatattgaccgccaccttgtgcatgaggtgacgtcaccgcag
gctttcgaaggcttgcgcatgacgggccgcacggtccgcgctcccgacaagacgatcgcc
gttccggatcacaacgtgcccacgacgctggggcgcgagaaggccgacaacatgaccgaa
gacagccgcattcaggttgcggcccttgataccaatgccaaggaattcggcatccattac
tacccggtcagcgacattcgtcagggcatcgtgcacatcgttggtcccgaacagggctgg
accctgcccggcatgactgtggtgtgcggcgacagccacacggcgacacatggggccttt
ggcgctttagcgcatgggatcggcacatccgaggtcgaacatgttctggccacgcagacg
ctgatccagaagaaatccaagaacatgaaggtcgagattaccggcaaactgcgcccgggt
gtcacggccaaggacatcaccctttcagtgatcggccataccgggactgccggtggcacc
ggctatgtgatcgaatactgcggtgaagcgatccgcgatctgtcgatggaaggtcgcatg
accgtgtgcaacatggccattgagggcggcgcgcgcgcaggcctcatcgcgccggacgaa
aagacctttgaatactgcatgggcaggccgcacgcgcccaaaggcgcacagtgggaagcg
gccatgtcatggtggaaaacgctctattcggatgatgacgcgcattgggacaaggtgatc
accatcaagggagacgacattgcacccgtggtcacatggggcacatctccggaggatgta
ctgccgatcaccgcaagcgtgcccaagcccgaggacttcaccggcggcaaggtcggagcc
gtgcagcgctcgcttgaatacatggggctgacctccggcacaccactgtccgaggttgaa
attgacacggtatttatcgggtcctgcacgaacggtcgcatcgaggatttgcgcgccgca
gccgaaatcctgaaaggcaagaagaagaaggacgggttgcgcgcgatggtcgtgcccggt
tccggactcgtgcgcgcgcaggccgaagaggaagggcttgcggatatcttcaaggaagcc
ggttttgaatggcggttggccgggtgctccatgtgccttgcgatgaaccccgatcagttg
caacccggtgagcgctgtgcggccacatcaaaccgcaacttcgagggccgtcagggccgg
ggcggacgcacgcatctgatgtcccccgccatggccgccgccgccgccatcacaggccgc
ctgacggacgttcgcgacctgatgtga
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