Roseobacter denitrificans: RD1_0925
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Entry
RD1_0925 CDS
T00376
Symbol
gntR
Name
(GenBank) transcriptional regulator, GntR family, putative
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_0925 (gntR)
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RD1_0925 (gntR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_DeoR
HTH_11
HTH_36
HTH_Crp_2
HTH_20
HTH_24
HTH_IclR
HTH_41
TrmB
MarR
MarR_2
DUF4423
LexA_DNA_bind
RepL
PaaX
EAP30
HTH_29
Rrf2
HTH_23
FaeA
Motif
Other DBs
NCBI-ProteinID:
ABG30593
RoseoBase:
RD1_0925
UniProt:
Q16BQ0
LinkDB
All DBs
Position
895831..896565
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AA seq
244 aa
AA seq
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MLQDVHVMTRISTVRFTTDQPIGETVRIIVEKLSVRIESGQYPPESRLPSERALAAELGV
SRNTVRDALDVLEANGMLRRRQGSGSFVLPQGQDAPAPGSIGERTGPLDHLIVRSILEPE
MMRLAVMNMSPNDLDQLSQVVAQIEAVRTDLNEFIRREEEFYRLIAKATRNPLLEACYEL
TIEVCRQSFRTAIMRKHLTPGRIQSYQTRFNSLFNAIATRDVEAAVEITKLHLVEEQKLF
LHEG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgttacaggatgtccatgtcatgacccggatcagcaccgtcagattcacgaccgatcag
ccgattggggaaaccgtgcggatcattgtcgaaaagctttccgtcaggatcgaatccggt
cagtaccccccggaatcccgactgcccagtgagcgtgcgctggcggcggagcttggcgtg
tcacgcaatacggtgcgcgatgcgctggatgtcctcgaagccaacggtatgttgcggcgc
aggcagggatccgggagttttgtgctgccccagggccaggatgcccccgcaccgggatca
atcggtgagcgaaccggccccttggatcatctgatcgtgcgctccattctggagcctgaa
atgatgcggcttgcggtgatgaatatgtcacccaacgacctcgatcagctgtcgcaggtt
gtggcgcagatcgaggcggtgcgcacggatctcaacgaattcatccgccgggaagaggaa
ttctatcgcctgatcgccaaggcgacgcgcaatcccttgctggaggcgtgctacgagttg
acgattgaagtctgccggcagagttttcgcacggcgatcatgcgcaaacaccttacaccg
ggacgcattcagagctatcagacgcggttcaactcactgttcaatgccattgccacgcgg
gatgtggaggcggcggtcgagatcaccaaactgcatctggtggaggagcaaaaactgttc
ctgcacgagggctaa
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