Roseobacter denitrificans: RD1_1609
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Entry
RD1_1609 CDS
T00376
Symbol
sucA
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00020
Citrate cycle (TCA cycle)
rde00785
Lipoic acid metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
rde01210
2-Oxocarboxylic acid metabolism
Module
rde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD1_1609 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RD1_1609 (sucA)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RD1_1609 (sucA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ABG31236
RoseoBase:
RD1_1609
UniProt:
Q169V7
LinkDB
All DBs
Position
complement(1551770..1554730)
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AA seq
986 aa
AA seq
DB search
MTDHPANDQFHASSFMQGHNAEYLEQMYARYANDPSAVDAAWQAFFKAMGDDEVSVKREA
QGPSWARSDWPPQPGDDLTAALTGEWAPEPEVQAAAGKIQAKAAEQGVEVTDEQIKRAVL
DSIRALMLIRAYRIRGHLVADLDPLGMREQTPHPELDPKSYGFTEADMDRPIFIDKVLGL
EMASMREILSIVKRTYCGTFALQYMHISNPEEAGWLKERIEGFGKEVAFTREGRKAILSK
LVEAEGFEKFLHVKYMGTKRFGLDGGESLVPAMEQIIKRGGALGVRDIVIGMPHRGRLSV
LANVMAKPYRAIFNEFQGGSFKPEDVDGSGDVKYHLGASSDREFDGNTVHLSLTANPSHL
EAVNPVVLGKCRAKQDQNNDPDRTSVMPILLHGDAAFAGQGVVAECFALSGLRGHRTGGT
MHIVVNNQIGFTTAPHFSRSSPYPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKF
KRDVVIDIFCYRRFGHNEGDEPMFTNPMMYKKIKGHKTTLSLYTERLVKDGLIPEGEIED
MKAAFQAYMNEEFEAGKEYRPNKADWLDGKWSHLDKQKNQYQRGKTAISKATMAEVGKAL
YTAPDDYPIHKTVGRLLEAKKQMFDTGKGFDWATAEALAFGSLLTEGYPVRLAGQDSTRG
TFSQRHSGLVNQNTEERFYPLNNIKSGQAQYEVIDSMLSEYAVLGFEYGYSMAEPNALTL
WEAQFGDFANGAQIMFDQFISSGESKWLRMSGLVCLLPHGFEGQGPEHSSARLERFLQMC
GQDNWIVANCTTPANYFHILRRQIHRSFRKPLILMTPKSLLRHKLAVSTAEEFTTGSSFH
RLMWDDAQQGNSKTELVPDKKIRRVVMCSGKVYYDLLEERDERGIDDIYILRVEQFYPFP
AQSAVKELERFKQAEVVWCQEEPKNQGAWTFIEPNIEWVLGRIKAKHPRPIYVGRATSAS
PATGLASQHNAQQAALVNEALTIEGN
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccatcccgccaacgaccagttccatgcgtcctccttcatgcaggggcacaac
gcggaatatctcgaacagatgtatgcgcgctatgccaatgacccctcggcggtcgacgcg
gcatggcaggcgtttttcaaagccatgggcgatgatgaggtttcggtcaaacgcgaggca
caggggccatcctgggcgcgcagcgactggccaccccagcccggtgacgatctgaccgca
gcgctgaccggtgaatgggcgccggagcccgaggtccaagcggccgctggcaaaattcag
gccaaagccgccgagcagggtgtcgaagttacagatgagcagatcaaacgtgcggtgctg
gattccatccgcgcgctgatgctgatccgcgcctaccgcatccggggtcaccttgtggcc
gatctggacccgctgggcatgcgcgagcagaccccccaccccgaacttgaccccaaatcc
tacgggttcactgaggcggacatggatcgcccgatcttcatcgacaaggtgcttggcctt
gaaatggcgtcgatgcgcgaaatcctgtcgatcgtaaagcggacctactgcgggaccttt
gcgctgcaatacatgcacatttccaaccccgaagaagccggctggctcaaggagcggatc
gaggggttcggcaaggaagtcgccttcacccgcgaagggcgcaaggcgatcctgtccaaa
ctggttgaggcagagggttttgagaaattcctccacgtcaaatacatgggcaccaaacgg
ttcggccttgatggcggcgaaagcctcgtgcccgcgatggaacagatcatcaaacgcggc
ggcgcgctgggtgtgcgcgacatcgtgatcggcatgccccaccgggggcggctgtcggtg
ctggccaatgtgatggccaaaccctaccgcgccattttcaacgaatttcagggcggcagt
ttcaagcccgaagacgtggatggttcaggagacgtaaaatatcacctgggcgcgtcctcg
gatcgcgagtttgacggcaacacggtgcacctgagcctgacagccaaccccagccacctt
gaggcggtcaaccctgtggttctgggcaagtgccgtgccaagcaggatcagaacaacgat
ccggaccgcaccagcgtcatgccgatcctgttgcacggcgatgcggcctttgccggacaa
ggggtcgtggcggaatgtttcgcgctttccggtctgcgcgggcaccggacgggcggcacc
atgcatatcgtggtcaataaccagatcggctttaccacggcaccgcatttttcacgctcc
tcaccctatccgacagacaatgcgctggtggtcgaagcgcccattttccacgtcaacggg
gatgatccggaggcggtcgttcatgcggccaaggtcgcgacggaattccgccagaagttc
aagagagatgtggtaattgatatcttctgctaccgccggtttggtcataacgaaggcgat
gagccgatgttcaccaacccgatgatgtacaagaagatcaagggccataaaaccacgctc
agcctttacactgaacggctggtcaaggacgggctgatccccgaaggcgagatcgaagac
atgaaagccgcgtttcaggcctatatgaacgaagagttcgaggccggaaaagagtatcgc
ccgaacaaggcggactggcttgacgggaaatggtcacatctggacaaacagaaaaaccag
taccagcgcggcaagacggcgatctccaaggccacgatggccgaggtgggcaaggccctt
tacacagcaccggacgactatccgatccacaagacggtcgggcgtctgctggaggccaag
aagcagatgttcgacacgggcaaggggtttgactgggcaaccgccgaggcgctggccttc
ggctcgctgctgaccgagggctaccctgtgcgccttgccgggcaggacagcacgcgcggc
accttttcgcagcgccactccggtctggtgaaccagaacaccgaagagcgcttctatccg
ctcaacaacatcaaatccgggcaggcccaatatgaggtcatcgactcgatgctgtcggag
tatgcggtgctcgggttcgaatacgggtattccatggccgaacccaacgcgctgacgctc
tgggaagcgcaattcggtgactttgccaatggcgcgcagatcatgttcgaccagttcatt
tcttcgggtgaaagcaaatggctgcgcatgtcgggccttgtctgcctgctgccccacggg
ttcgaggggcaagggccggagcactcctccgcccggctggaacggtttttgcaaatgtgc
ggtcaggacaactggatcgttgccaattgcacgacaccggccaactatttccacatcctg
cggcgtcagattcaccgctccttccgcaagccgctgatcctgatgaccccgaaatcgctg
ctgcgccacaagctcgcggtcagcacggccgaggaattcaccaccggttccagcttccac
cgcctgatgtgggacgatgcgcagcagggcaattccaaaaccgaactggtgccggacaag
aaaatcagacgcgtcgtgatgtgttcgggcaaggtctattacgacctgcttgaggaacgc
gacgaacgcgggatcgatgacatctacatcctgcgggttgagcagttctatcctttcccc
gcgcaatctgcggtcaaggagcttgaacgcttcaaacaggccgaggttgtctggtgtcag
gaagagcccaagaaccagggcgcatggacctttatcgaacccaacatcgaatgggttctg
ggccgcatcaaagccaaacacccaaggccgatctatgtgggccgcgccacctccgcctcg
cccgcgaccggactggcctctcagcacaacgcacagcaagcagccctcgtgaacgaagcg
ctgacgattgaaggaaactaa
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