Roseobacter denitrificans: RD1_1617
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Entry
RD1_1617 CDS
T00376
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00020
Citrate cycle (TCA cycle)
rde00270
Cysteine and methionine metabolism
rde00620
Pyruvate metabolism
rde00630
Glyoxylate and dicarboxylate metabolism
rde00680
Methane metabolism
rde00710
Carbon fixation in photosynthetic organisms
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Module
rde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rde_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD1_1617 (mdh)
00620 Pyruvate metabolism
RD1_1617 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
RD1_1617 (mdh)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
RD1_1617 (mdh)
00680 Methane metabolism
RD1_1617 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RD1_1617 (mdh)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
RD1_1617 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
3HCDH_N
DUF357
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ABG31244
RoseoBase:
RD1_1617
UniProt:
Q169U9
LinkDB
All DBs
Position
complement(1559670..1560632)
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AA seq
320 aa
AA seq
DB search
MARPKIALIGAGQIGGTLAHLAALKELGDVVLFDIAEGIPEGKALDIAESGPSAKFDARM
SGTQSYADIAGADVCIVTAGVARKPGMSRDDLLGINLKVMKSVGEGIAAHAPNAFVICIT
NPLDAMVWALREFSGLPHEKVCGMAGVLDSARFRHFLADEFDVSMKDVTAFVLGGHGDTM
VPLVRYSTVAGIPLPDLVKMGWTTQDKLDAIVQRTRDGGAEIVGLLKTGSAFYAPATSAI
EMAESYLKDQKRVLPCAAYVDGAYGLKGFYVGVPTVIGAGGVERVVEISMNKDEQAMFDN
SVNAVKGLVAACKGIDDSLS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacccaaaatcgcactgatcggcgcaggccagatcggcggcacgctcgcccac
ctcgcagccctcaaggaattgggcgacgttgtcctcttcgacattgccgaaggaatcccg
gaaggcaaagcgctggacatcgcggaaagcggcccatccgccaaattcgacgccagaatg
tccggcacacagtcctatgcggatatcgcgggggcagacgtctgcatcgtcaccgccggt
gtcgcgcgcaaaccgggcatgagccgcgatgacctgctgggcatcaacctcaaggtcatg
aaatctgtcggtgaagggatcgcggcccatgcgccgaatgcctttgtgatctgcatcacc
aacccgctcgatgcgatggtctgggcgctgcgcgaattctccggcctgccgcacgaaaaa
gtctgcggcatggcgggtgtccttgattcggcgcgcttccgccatttcctcgcggatgaa
tttgacgtctcgatgaaagacgtcaccgccttcgttctgggcggtcatggcgacacgatg
gtgcccctcgtgcgctattccaccgttgccggcattccgctgcccgatctggtgaaaatg
gggtggaccacacaggataaactggacgcgatcgtgcaacgcacccgggatggcggcgct
gaaatcgtcggattgctgaaaaccggttcggccttttacgcacccgccacatcggctatc
gaaatggccgaaagctacctcaaggatcagaaacgcgtgctgccctgcgcggcctatgtc
gacggcgcttatggcctcaagggcttttacgtgggcgtgccaaccgtgatcggcgcaggt
ggcgttgaacgcgtggtcgaaatctcgatgaacaaagatgaacaggccatgttcgacaac
tccgtcaacgcggttaaaggacttgtcgcagcctgcaaaggcatcgacgacagcctgtcc
tga
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