Roseobacter denitrificans: RD1_2806
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Entry
RD1_2806 CDS
T00376
Name
(GenBank) TRAP transporter, DctM subunit, putative
Organism
rde
Roseobacter denitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
CitMHS
UPF0239
Motif
Other DBs
NCBI-ProteinID:
ABG32335
RoseoBase:
RD1_2806
UniProt:
Q165K8
LinkDB
All DBs
Position
complement(2673622..2675976)
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AA seq
784 aa
AA seq
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MFFGLDGVEVGLIIVAICLFGGILSGFPVAFAIAGAGVISFGIIAALDSAGLLIHQAIDT
SSQVYRDLVNSGVKADTISIFRYPELPRIAEPVFPSGWEVALDRNVSFVVNRMNERVLAG
QSIETLLAVLMFVLMGITLERSKIANDLLTSMARVFGPLPGGLAVSIVVVGAFLAASTGI
VGATVVTMGLLALPTMLRNGYSPELSTGVIAASGTLGQIIPPSIVIVLLGTLAGDLYSAA
QERRASLAGCTDALTYLGEPAVLSVGTLFQAALLPGIMLALLYALYAFGYALLNPDKAPA
VELGSTNAEPITRNEAFTWFLGAPVLIIVGTILLGNLGVVGSQSTDVSRFSDIGEGASLR
TTVSEQCQASMIELHGQEAWDAAVAQQVEIDAAGGIQASAALSEEELATALQNKIDNAAP
IGTGIAIILILTGLFLTTARGVSPSSPTRPLLIGAMGAVVILLLDIIAISPTTSSGATVI
ILALPFAALMYGVVYATKICARNELIRVVFPPLILIVAVLGSILGGITNPTPAAALGAGG
AIMLAAYRKLRDQDKTPKIIIWSTLAIIICILVGINFDLRVNTDEVGFESWFAFFVAYGA
YLYAIFGLLFSCWVLYTSGILSPVVRETAKVTSMVFTILIGSQLLNLVVISFGGEHYIQQ
FLKSFDNEFTVFLIVMLVLFVLGFVLDFLEIIYIVIPIVGPVIYGGTFDPKWVTIMIAVN
LQTSFLTPPFGFALFYLRGVAPKEVTTGHIYRGIIPFVLIQVVGLALLWTFPGIVTIIPD
LIPN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcggtctagacggcgtagaagttggcctgatcatcgtagccatctgccttttt
ggtggcattctttccgggttcccggtggcttttgccattgcaggggcaggggtgatatcc
ttcgggatcatcgcagcgctcgacagcgccggcttgctgatccaccaagccatcgacaca
agcagccaggtctaccgggatctggtaaactcgggcgtcaaggctgataccatatcgatc
ttccgataccccgaattaccgcgcatcgccgagccggttttcccaagcggatgggaagtg
gcgctggatcgcaacgtgtcctttgtggtcaaccggatgaacgaacgcgtgcttgccggt
cagtcgatcgaaacgcttctggctgttttgatgttcgtcctgatgggcatcacgctggaa
cgctccaagatcgcgaatgacctgttgacttccatggcgcgggtttttggtccgttgccc
ggcggtcttgcggtgtccatcgtcgttgtgggggcgtttctggcggcgtccacggggatc
gtgggagcgactgtcgtcaccatgggcctgctggccctgcccacgatgttgcgcaacggc
tattcgcctgagttgtccaccggcgtgattgcggcctcggggacccttggacagatcatt
ccaccttccatcgtgatcgttctgctcggcaccttggcgggggatttgtattccgcggca
caggaacgacgcgccagccttgcgggatgcacggacgcgctgacctacctcggtgaacct
gcggttctgtctgtcgggacactctttcaggccgctttgctgccgggtatcatgcttgcg
ctgctctatgcgctttatgcctttggctacgccctgttgaacccggacaaggccccggcg
gtcgagctgggcagcaccaacgctgaacccatcacccgcaatgaagccttcacatggttt
ttgggcgcacctgtcctgatcatcgttggtacgattttgctgggcaaccttggcgtagtc
ggcagccaatcaaccgatgtgtcccgcttttcggacataggggagggcgcatcgctgcgc
acgacggtcagcgaacagtgtcaggcctcgatgattgaattgcatggtcaggaagcctgg
gatgcggcggtggcacagcaggttgaaattgacgccgccggcggcattcaggcgtctgcc
gctctgagcgaggaagaactcgccacagcgctgcagaacaagatcgacaacgcggcaccc
atcggcaccgggattgcgatcatcctgatcctgaccggtctgttcctgacaactgcgcgg
ggcgtatcgccctcctcaccgacccggccgctgctcatcggggccatgggcgcggtggtg
atcctgctgcttgacatcatcgccatttcgcccactacgtcttcgggcgcgacggtgatc
attctcgccctgccatttgcagcgctgatgtatggcgtcgtctatgcaacgaaaatctgc
gcgcgcaacgagcttatccgcgtcgtctttccgccgcttatcctgatcgttgccgtgctc
ggctcgatccttggtggcatcaccaacccgacgcccgcggcggcgctcggggcgggtggc
gcgatcatgctggcggcttatcgcaaactgcgggatcaggataaaacacccaagatcatc
atctggtccacgctggcgatcattatctgcatactggtcggcatcaatttcgatttgcgt
gtcaacaccgacgaggtgggctttgaaagctggtttgccttcttcgtggcatatggtgcc
tatctctacgcgatcttcgggctgctgttttcctgctgggttctttacacctcgggtatc
ctgtcgccggtagtgcgcgagacggcgaaggtcacgagcatggtctttaccatcctcatc
ggctcgcaactgctgaacctcgtggtgatctcctttggtggggagcactatatccagcag
ttcctgaagtcctttgacaatgaattcacggtgttcctgatcgtgatgctcgtgctcttc
gtgctcggcttcgtgctcgatttccttgagattatctacatcgtcatacccatcgtcggg
ccggtcatctatggcggcacgttcgatcccaaatgggtgacgatcatgatcgcggtgaac
ctgcaaacgtccttcctgacgccgccctttggctttgccctgttctatctgcgcggggtt
gctccgaaagaggtcaccaccgggcatatctatcgcggcatcattcctttcgtactgatc
caagtggtgggccttgccctgctgtggaccttccctggcattgtaacgatcatcccggat
ctgatcccgaactga
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