Roseobacter denitrificans: RD1_3080
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Entry
RD1_3080 CDS
T00376
Name
(GenBank) sugar ABC transporter, ATP binding protein, putative
KO
K10559
rhamnose transport system substrate-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_3080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3080
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
RD1_3080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ABG32591
RoseoBase:
RD1_3080
UniProt:
Q164K2
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All DBs
Position
complement(2952252..2953244)
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AA seq
330 aa
AA seq
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MSVLKKLAASVALAGTMVASPALAEDVRIALVVKALGIGFFEAAAEGAQEAAEELGNVEI
IYTGPTDTTAEGQIEVINSLIAQQVDAIAVSSNDTDALVPALQRAMQRGITVISWDSGVA
PEGRQLHLNPSSNALIGNMIIKLAADHLPEGGEVALLSATTTSTNQNIWMEEMNKVMGNY
PDIEVVATVYGDDLADKSYREATGLMQSYPDLDAIIAPTSVGIVAAAQAVVDAGKVGQVN
VTGLGLPSEMAGAIESGASQSFAIWNPIDLGYSATMLAYELSQNGVEAAPGAEIPMGRMG
SLTLDENNEGAMADPFVYDASNIEQFKSIF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtacttaagaaactagcagcatccgttgcattggcaggaacgatggtcgcaagc
cccgcgctggcagaggacgtgcgcatcgcgctggtcgtcaaggcgctgggtatcggcttt
ttcgaagcggctgcggaaggtgcgcaggaggctgcggaagaacttggcaatgtcgaaatc
atctacacagggcccactgacacgaccgccgaagggcagatcgaagtcatcaattcgctc
attgcccagcaggtcgacgccattgccgtgtcttcaaatgacacggacgctttggtgccc
gcccttcagcgcgcgatgcagcgcgggatcacggtgatcagctgggattccggtgtggcg
ccagaggggcgtcagttgcatctcaacccatcgtccaacgcgctgattggcaatatgatc
atcaaactggctgcggatcatttgccagagggcggcgaggttgccttgctctctgcgacc
acaacatccaccaaccagaacatctggatggaggagatgaacaaggtgatgggcaactat
ccggatatcgaagttgtcgcgacggtatacggggatgatcttgccgataaatcctaccgc
gaggcgaccggcctgatgcaatcctatccggatctggacgccatcatcgcgccgacatcc
gtcgggatcgtggctgcggcgcaagccgttgtggatgcgggcaaggtcggtcaggtgaat
gtcacgggccttggcctgccatccgaaatggccggcgcgattgaatcgggtgcctcgcaa
tctttcgccatttggaacccgattgatctggggtattccgcgaccatgcttgcctatgaa
ctcagccagaacggcgttgaggccgcgcccggtgccgaaatccccatggggcgcatgggc
agcctgacgcttgatgaaaacaacgaaggcgccatggccgatcccttcgtctatgacgcc
agcaacatcgagcagttcaagtcgattttctaa
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