Roseobacter denitrificans: RD1_3240
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Entry
RD1_3240 CDS
T00376
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00470
D-Amino acid metabolism
rde01100
Metabolic pathways
rde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RD1_3240 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RD1_3240 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rde01011
]
RD1_3240 (alr)
Enzymes [BR:
rde01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
RD1_3240 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
rde01011
]
Precursor biosynthesis
Racemase
RD1_3240 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ABG32742
RoseoBase:
RD1_3240
UniProt:
Q163V1
LinkDB
All DBs
Position
3109167..3110201
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AA seq
344 aa
AA seq
DB search
MSTAVLTIDLSALAANWRSLNALSDVETAAVVKANAYGLGVGTAASALAEAGARHFFVAV
AEEGVALRQALGAGPQISVFSGHMAGDTALIRDAGLTPMINSIDQMIRHVEALPEHDFGI
QLDTGMNRLGMEDGEWRAVREVATQRPPSLVMSHLACADEPSHQMNRQQLDCFVEMTQDI
TAPRSLAATGGILMGPDYHFDLTRPGIGLYGGLPFVDALPVVQLDVPVIQVRDVHPGETV
GYANTWTATAPARIATISAGYADGLIRAMGAKARLHAGDTALPVVGRVSMDLIGVDVTAL
GSDPDSLQLIGRHQSVDTVAGFADTIGYEILTSLGDRYKRVYTQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgctgtcctgacaattgatctttctgcgctcgctgcaaactggcgcagtctg
aacgcgctatcagacgtcgaaaccgccgctgtcgtcaaagccaacgcctatggccttggc
gtaggcactgcggcatcggcccttgctgaggccggtgcgcgtcatttctttgtcgccgtt
gccgaagagggcgtggcactgcggcaggcgcttggcgcggggccgcagatcagcgtattt
tccggccatatggcgggggataccgccttgatccgggacgcgggcctcacgccgatgatc
aattccatcgaccagatgatccgacatgtggaggccctgcccgagcatgactttggcatc
cagcttgataccggcatgaaccggctcggcatggaagacggcgaatggcgcgcggtgcgc
gaggtcgccacacagcgccctcccagcctcgtgatgtcgcaccttgcctgcgcggatgag
ccgtcccaccagatgaaccgccaacagttggactgctttgtcgagatgacacaggacatc
accgcgccacgctcgcttgcggcgacaggcgggattttgatggggcctgactatcatttc
gacctgacgcgcccggggattggcctttacggcggtctgccctttgtcgacgcgctgccg
gtggtgcagcttgatgtgccggtcattcaggtgcgcgacgttcaccccggcgaaaccgtg
ggctacgccaacacatggacggccaccgcgcctgcgcgcattgccacgatctcggcaggt
tatgccgatggtctgatccgcgcgatgggggccaaggcacggctgcatgctggcgatact
gccctacccgtcgtgggccgcgtgtccatggatctgatcggtgtcgatgtgacggcactg
ggcagcgacccggacagcctgcagcttatcgggcgtcaccagtcagtcgatacggttgcg
ggctttgcagataccatcggatatgaaatactgacctctctcggcgacagatacaaaagg
gtctatacgcagtga
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