Roseobacter denitrificans: RD1_3262
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Entry
RD1_3262 CDS
T00376
Symbol
prfC
Name
(GenBank) peptide chain release factor 3
KO
K02837
peptide chain release factor 3
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rde03012
]
RD1_3262 (prfC)
Translation factors [BR:
rde03012
]
Prokaryotic type
Release factors
RD1_3262 (prfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
SRPRB
Arf
FeoB_N
SIS
RNA_pol_Rpb5_N
Roc
Ras
Motif
Other DBs
NCBI-ProteinID:
ABG32763
RoseoBase:
RD1_3262
UniProt:
Q163T0
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All DBs
Position
3126388..3127995
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AA seq
535 aa
AA seq
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MLDTPKNRADLPPEIARRRTFAIISHPDAGKTTLTEKFLLFGGAIQMAGQVRAKGEARRT
RSDFMAMEKDRGISVSASAMSFDFKEFRFNLVDTPGHSDFSEDTYRTLTAVDAAVMVIDG
AKGVESQTQKLFEVCRMRDLPILTFCNKMDRESRDVFEIIDEIQENLAIDVTPASWPIGV
GRDFIGCYDILRDRLELMDRADRNRVAESVEINGLDDPKLIELVPGELLEKLREDLEMAR
ELLPPLDIAAMHEGSLTPIWFGSAINSFGVKELMDGIAQYGPQPQIQSAEPRQILPEEKK
VSGFVFKVQANMDPKHRDRVAFVRIASGHFNRGMKLTHVRLKKPMAISNPVMFLASDREL
AEEAWAGDIIGIPNHGQLRIGDTLTEGEAIRVTGIPSFAPELLQTARAGDPLKAKHLEKA
LMQFAEEGAAKVFKPAIGSGFVVGVVGQLQFEVLASRIELEYGLPVRFEASQFTSARWVS
GDKQAVDKFTESNKQHIATDHDGDTVYLTRLQWDIDRVERDHPQVKLTATKEMMV
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatacaccaaaaaaccgcgcggatttaccgcccgaaatcgcccggcggcgcacc
tttgcgatcataagccaccctgatgccggcaagaccacattgaccgaaaaattcctgctc
tttggcggggccatccagatggccggtcaggtgcgcgccaaaggcgaagcacgccgcacg
cgctccgacttcatggcgatggaaaaggaccgcggcatctctgtctccgcctccgccatg
tcattcgacttcaaggagttccggttcaacctcgtcgatacgcccggccacagcgatttt
tccgaggatacctaccgtacactgacggccgtggatgcagcggtgatggtgattgacggg
gcgaaaggcgtggagagccagacgcagaaactctttgaagtctgccgtatgcgcgacctg
cccatcttgacattttgcaacaaaatggaccgcgaaagccgggatgttttcgagattatt
gacgaaattcaagaaaacctcgccattgacgtgacccccgccagttggcccatcggggtg
gggcgtgacttcatcggatgttacgatattctgcgcgaccgccttgaattgatggaccgc
gccgaccggaaccgcgtggccgaaagtgtcgagatcaatggcttggatgaccccaaactg
atcgaactggtcccgggtgaactgcttgaaaaactgcgcgaagatcttgagatggcgcgc
gaacttttgccgcccctcgacattgccgcgatgcacgaagggtccctgacaccgatctgg
ttcggctcggccatcaattcatttggcgtcaaggaattgatggatggcatcgcccaatat
ggcccgcaaccacagatccaatccgccgagccacgccagattctgcccgaggaaaagaaa
gtatccggctttgtattcaaggtgcaggccaacatggatccaaagcaccgcgaccgcgtt
gcattcgtgcgcatcgcatcaggccatttcaatcggggcatgaaactgacccacgtgcgt
ctgaaaaagccgatggcgatttccaaccccgtcatgtttctcgcgtctgaccgcgagttg
gccgaagaggcatgggcaggcgatatcatcggcatcccgaaccatggccagttgcgcatc
ggcgatacgttgaccgaaggcgaagcgatccgggtcacgggcatcccctcctttgcgccg
gaacttttgcaaaccgcacgcgccggtgatccactcaaggcgaaacatctggaaaaagcg
ctgatgcaattcgccgaagagggtgctgccaaggtcttcaaacccgccatcggatcggga
tttgtggtgggcgtcgtcggacagttgcaatttgaagtgttggccagccgcattgaactg
gaatacggcctgcctgtgcggttcgaggcgtcgcaattcacctcggcgcgctgggtcagt
ggcgacaaacaggcggtggacaaattcaccgaaagcaacaagcagcatatcgcgacagat
cacgacggcgatacggtatacctcaccagactgcagtgggacatcgaccgggtggagcgg
gaccatccacaggtgaagctaaccgcgaccaaggaaatgatggtttag
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