Roseobacter denitrificans: RD1_3333
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Entry
RD1_3333 CDS
T00376
Symbol
gatB
Name
(GenBank) glutamyl-tRNA(Gln) amidotransferase, B subunit
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00970
Aminoacyl-tRNA biosynthesis
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RD1_3333 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rde03029
]
RD1_3333 (gatB)
Enzymes [BR:
rde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
RD1_3333 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
RD1_3333 (gatB)
Mitochondrial biogenesis [BR:
rde03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RD1_3333 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
ABG32832
RoseoBase:
RD1_3333
UniProt:
Q163L1
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All DBs
Position
3197980..3199491
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AA seq
503 aa
AA seq
DB search
MLDLTYETPAPKVISGAKEDWELVIGMEVHAQVTSAAKLFSAASTQFGAEPNNNVSFVDA
AMPGMLPTINEYCVEQAVRTGLGLKAEINLHSAFDRKNYFYPDLPQGYQISQLYHPIVGE
GEVLVEMGNGTARLVRVERIHLEQDAGKSIHDMDPNMSFVDLNRTGVALMEIVSRPDIRG
PEEAAAYLGKLRQILRYLGTCNGDMQSGAMRADVNVSICRPGQYEKYQATQDFSHLGTRC
EIKNMNSMRFIQQAIEVEARRQIAIVEAGGTVDQETRLYDPDRNETRSMRSKEEAHDYRY
FPDPDLLPLEIEQAWVDDIAANLPELPDAKKARFRNDFGLSDYDASVLTADLDSAGYFEA
VAAGRDGKMAANWVINELFGRLKKEDHAITDSPVSPAQLGGIIDLIASDAISGKIAKDVF
EICYTTGRDPAEIVETEGMKQVTDTGAIEAAVDEIIAANPDQVAKARENPKLAGWFVGQV
MKATGGKANPKVVNQLIAKRLAE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatctgacttatgagacccccgcacccaaggtgatttccggtgcgaaggaagac
tgggaactggtcatcggcatggaggtgcacgcgcaggtcacctcggctgcgaagctgttt
tccgccgcctccacccaattcggggccgagccgaacaataatgtatccttcgttgatgcg
gccatgcccggtatgctgcccacgatcaacgaatactgtgttgaacaggcggtgcgcacc
gggctgggcctgaaggcagaaatcaacctgcacagcgcttttgaccgcaagaactatttt
tacccggatttgccacagggttatcagatcagccagctctaccacccgattgtcggtgaa
ggcgaagtgctcgtcgaaatgggcaacggcacggcccgtctggtgcgggtcgaacgcatt
caccttgaacaggacgcaggcaaatcgatccatgatatggacccgaacatgtcctttgtg
gacctgaaccgcaccggcgtcgccctgatggagatcgtctcgcgccccgacatccgcggc
cccgaagaagcggcggcctatctgggcaaactgcggcagatcctgcgctatctcggcacc
tgcaacggtgacatgcagtcgggcgccatgcgcgcggacgtcaacgtgtcgatctgccgg
cccggccagtacgaaaaatatcaggccactcaggacttcagccatctgggcacgcgctgc
gagatcaagaacatgaactccatgcggttcatccaacaggccatcgaggtcgaggcgcgc
cgccagatcgcgatcgtcgaggctggcggtacggttgatcaggaaacccgcctttatgat
cctgaccgcaacgagacacgctccatgcgctccaaggaagaggcgcatgactaccgctat
ttccccgaccccgacctgttgccgctcgaaatcgaacaggcatgggtggatgacatcgcc
gccaacctgcccgaactgcctgacgccaagaaggcgcggtttcgcaatgatttcggtctg
tcggattatgacgcttcggtgctgaccgccgatctggattcagcgggttatttcgaggcc
gtggcggcaggccgggatggcaagatggcggccaattgggtgatcaacgaactcttcggg
cggctcaagaaagaggaccacgccatcacggacagccccgtcagccctgcacaattgggc
ggcattatcgatctgatcgcctcggatgcgatctccggcaagatcgccaaggatgtcttt
gaaatctgctataccaccgggcgcgacccggcggagatcgtggaaaccgaaggcatgaaa
caggtcactgacacaggcgcaatcgaggctgccgtggatgaaatcatcgccgccaacccc
gaccaggtggccaaggcgcgcgaaaacccgaaacttgcgggctggttcgtcggtcaggta
atgaaagcgacaggcggcaaggccaaccccaaagtggtcaaccaactgattgcaaaaagg
cttgcagagtaa
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