Roseobacter denitrificans: RD1_3705
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Entry
RD1_3705 CDS
T00376
Symbol
xylA
Name
(GenBank) xylose isomerase
KO
K01805
xylose isomerase [EC:
5.3.1.5
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00040
Pentose and glucuronate interconversions
rde00051
Fructose and mannose metabolism
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RD1_3705 (xylA)
00051 Fructose and mannose metabolism
RD1_3705 (xylA)
Enzymes [BR:
rde01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.5 xylose isomerase
RD1_3705 (xylA)
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GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABG33177
RoseoBase:
RD1_3705
UniProt:
Q162B6
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Position
3575033..3576334
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AA seq
433 aa
AA seq
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MTDFFKDIPAIRYEGPDTENEFAFRHYNPDEVVMGKTLKDHLRFACAYWHSFAWPGGDPF
GGQTFERPWFGDTMELAKLKADVAFDMFERLGVPYFCFHDADVRPEGDTFAESTKNLEEI
TDYFAEKMDATGVKLLWGTANLFSHRRFMAGAATNPDPEVFAYSAATIKSCMDATRKLGG
ENYVLWGGREGYETLLNTDMARERAQAGRMLQMVVDYKHKTGFAGTILIEPKPQEPTKHQ
YDYDVATVYGFLKDFGLEGEVKVNIEQGHAILAGHSFEHELALARALGIFGSIDMNRNDY
QSGWDTDQFPNNVPEMALAYYEVLRAGGFDTGGTNFDAKLRRQSLDPADLILAHVGGMDA
CAAGLKAAAAMLEDGKLEAAREARYAGWSEGLGQKLLTSDLAEISDLVIAKGINPQPRSG
RQERLENLVNKYL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttcttcaaggacatccccgccatccgctatgagggacccgataccgagaac
gaatttgcgttccggcactataatccggatgaggtcgtcatgggcaagacgctcaaggat
cacttgcggtttgcctgcgcctattggcacagttttgcatggccgggcggcgaccccttt
ggcgggcagacctttgagcgtccgtggttcggggacacgatggagctggcgaaactcaag
gcggacgtcgcctttgacatgtttgaacgtctgggcgtgccctatttctgttttcacgat
gcagacgtacgccccgaaggcgacacctttgccgaaagcaccaagaacctcgaagaaatc
accgactatttcgccgaaaaaatggacgcaacaggcgtcaaactgctgtggggaacggcc
aatctgttctcgcatcgccgctttatggccggggcggcgaccaatcccgaccccgaggtt
tttgcctattccgccgcgacgatcaaatcctgcatggatgcgacccggaaactgggcggc
gagaactatgtgctctggggcgggcgcgaaggctatgaaacgctgctcaacaccgacatg
gcccgcgaacgcgcgcaggcgggccgtatgttgcaaatggtggtcgattacaagcacaag
accggttttgcaggcaccatcctgatcgaacccaaaccgcaggaaccgaccaagcaccag
tatgattacgatgtggcgacggtctatggcttcctcaaggatttcggcctcgaaggtgag
gtcaaagtcaacatcgaacagggccatgccattcttgcaggccatagttttgaacatgag
ttggcgctcgcacgggcactggggattttcggctcgatcgacatgaaccgcaatgactac
caatccggctgggataccgaccagtttccaaacaatgtccccgagatggcgcttgcctat
tacgaagttctgcgcgccgggggcttcgacacagggggcaccaattttgatgccaagctg
cgccggcaatcgcttgacccggcggatctgatccttgcgcatgtgggtggtatggatgca
tgcgctgcggggttaaaggccgctgcggccatgctggaggatggcaagctagaggccgcg
cgcgaggcgcgctatgcaggctggtcagaaggtttggggcaaaaactgctgacctctgat
ctggcggagatatcagatctggtgattgcaaaaggcatcaacccacagccccgctcagga
cggcaggagcggctggaaaatctggtgaacaaatacctttaa
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