Rothia dentocariosa: HMPREF0733_10027
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Entry
HMPREF0733_10027 CDS
T01343
Symbol
sucA
Name
(GenBank) oxoglutarate dehydrogenase (succinyl-transferring), E1 component
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00020
Citrate cycle (TCA cycle)
rdn00630
Glyoxylate and dicarboxylate metabolism
rdn00785
Lipoic acid metabolism
rdn01100
Metabolic pathways
rdn01110
Biosynthesis of secondary metabolites
rdn01120
Microbial metabolism in diverse environments
rdn01200
Carbon metabolism
rdn01210
2-Oxocarboxylic acid metabolism
Module
rdn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HMPREF0733_10027 (sucA)
00630 Glyoxylate and dicarboxylate metabolism
HMPREF0733_10027 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HMPREF0733_10027 (sucA)
Enzymes [BR:
rdn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
HMPREF0733_10027 (sucA)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
HMPREF0733_10027 (sucA)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
HMPREF0733_10027 (sucA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
HMPREF0733_10027 (sucA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
SERRATE_Ars2_N
Motif
Other DBs
NCBI-ProteinID:
ADP39485
UniProt:
E3H4D9
LinkDB
All DBs
Position
29311..33141
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AA seq
1276 aa
AA seq
DB search
MCARLEEAHTKPTYTQRDDSPLEDAGRLCRISPDATDKFTVKEEAFTVPNLPDHLVPEEF
AGNEWFVEEQYERYQQDKNLVDPSWWPIFQSIDKALQGTPAVSAPVTATQKAEATPSAPA
AAASITTPAPQPAAPTKSTASPAPKTSSKAENVEPLEDKIVPLRGPAKAVAANMEDSLTV
PTATTVRAVPAKLLIENRSAINAYLARTRGGKISFTHIIGYAVIRALAAMPSMNVTYGHD
EKGKPIAIHNANVNFGLAIDLPRPDGSRNLVVPNIKGAQTLSFLEFWQAYDDIVKRGRAG
QLGLEDFQGTTVTLTNPGGIGTVHSVPRLSKGQAAIIGVGALEYPAEFRGVAETMVAQHA
ISKVITLTSTYDHRVIQGAGSGEFLKIVESYLLGAEGFYDEIFQAIQIPFEPVRWSQDNQ
VNPDTEVSKVARIQQLIHAYRVHGHLIARTNPVGYQLHSNPDLNVESYGLTLWDLDRVWP
TGGFGDKEQLPLRTILARLREAYAGTLAVEYMYMEDRKAREWFQEKLEHGYSKPSRERLM
HVLEKLVEAEAFETFLQTKYLGQKRFSLEGGESLIPLLDAIINKAADNNMHGVAIGMAHR
GRLNVLTNIAGKSYAQIFREFSGTAAPYEGGSGDVKYHLGTEGTFTSTSGKQTQVYLAAN
PSHLEAVNTVLEGIVRAKQDVLNDQGIEGHPILPILIHGDAAFAAQGIVMETLQMANLRG
YTTGGTVHIVVNNQIGFTTSPKDGRTATNATDIARMTKAPVFHVNADDPEAVVRAGRLAF
EYRERFGRDAVIDLLCYRRRGHNEADDPSMTQPKMYQVIDNMPSTRTKYAEALVGRGDIT
QEEADEALSAYHSKLDAIFSETQAAVPAPETPNVAGLELPASQQSTEIVHGGNTAISRDT
FEHIAKAFGEVPEGFTVHKKLKKLCEQRVEMGTNGKVNWGMGELLAFGSLLMEGTDVRMS
GQDVQRGTFVQRHAVLHDHLTDDEWSPLQHLSDHQGKLRIYNSLLSEYGVIGFEYGYSVE
RPDSMVVWEAQFGDFANGAQTIIDEFVSSSEQKWGQRSSLVLLLPHGYEGQGPDHSSARI
ERYLQLCAENNMTVAVPSTPASYFHLLRRHAQHRPYKPLVVISPKQLLRLKAASSSIEDF
TEGSFQPVIGDRSGVTPAQVERVVFVSGRLYYDLEAERAKRGDTKTAIVSVEQLYPLPEA
EIKAQLDLYSNATDIVWAQDEPANQGQWPFMALNLLPIIDYRMRLVSRPASASPAAGTGK
RHAAEAEALMKQVFEG
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgagacttgaagaggcacacacaaagccaacttatactcagcgtgatgattcg
cccctcgaagatgcgggtcgtctgtgccggatttctccggacgcgacggataaattcaca
gtcaaggaagaggcgtttacagtgccaaatctgccagatcacctggtacctgaggaattt
gccggtaacgaatggttcgtcgaagaacaatatgaacgttatcagcaagacaaaaatctc
gtggatccttcgtggtggcccatttttcagtccattgataaggcccttcaaggaactccg
gcggtctccgccccggtaacagctacccaaaaagccgaggcgacaccttctgctccagcc
gctgcagcatctattactaccccggcacctcagcctgccgcaccaacaaagtcgacagca
tcgcccgctcctaaaacctcatcaaaggcagaaaacgtggaacctttagaagataaaatt
gtacccctacgcggaccggctaaagccgttgccgccaacatggaagactcgctcaccgtt
ccaaccgctacgacggtgcgcgcggtaccagctaaactgctgattgaaaaccgttctgcc
atcaacgcttatttagctcgaacccgcggcggcaagatttctttcacgcatatcattggg
tacgctgttattcgtgcgctcgctgccatgccttcaatgaacgtcacctacggtcatgat
gaaaaaggcaaaccgattgctattcacaatgcgaacgtgaacttcggtctggctatcgat
ctgccccgccctgatggctcccgcaacctcgtggttccgaatatcaagggtgcacagacc
ttgagcttcttggagttctggcaggcctacgacgatatcgtcaaacgtggtcgtgcaggc
cagcttgggctggaagatttccagggaactacggttactctcacgaaccctggcggtatc
ggtaccgtacactctgttcctcgtctttcgaaagggcaggccgcaattatcggtgtgggt
gctcttgaataccctgctgagttccgcggtgtggcggagacgatggtagcccagcatgct
atttccaaggttattacccttacgagcacctatgaccaccgcgttattcaaggtgctggt
tccggcgaattccttaagatagtagagagctacctcttaggtgccgaaggattctatgac
gaaatcttccaggctattcagattcccttcgaacctgttcgatggagccaggataatcag
gttaatcctgatactgaggtttctaaggtcgcccgcattcagcagcttatccacgcgtac
cgcgtgcacggtcaccttatcgcccgcaccaacccagtgggctaccagctacattcaaac
cccgatttgaacgtagaaagctacggtctgactctgtgggatctggatcgagtatggcct
acgggagggtttggcgacaaagaacagcttcctttgcgtactattctggcgcgtctacgt
gaggcatatgcgggtactctcgcggtcgagtacatgtacatggaagaccgtaaagcccgt
gaatggttccaagagaagctggagcatggctacagcaagcctagccgcgaacgtctgatg
catgttctggagaagcttgttgaggccgaggcctttgagaccttcctgcagaccaaatac
ctgggtcagaagcgtttctcactcgaaggcggagagtcgctcatccccctgctggatgcg
atcatcaacaaagcggcagataataatatgcacggggtcgccatcggtatggcgcatcgt
ggccgcctcaatgttctgaccaacatcgcgggtaagtcttacgcccagattttccgtgag
ttcagcggtactgcggcaccatatgaaggtggttctggcgatgtgaaataccaccttggc
accgagggcacgttcacctctacctcaggcaagcagactcaggtgtatttggctgctaat
ccttcacatttggaggctgttaacaccgttctggaaggcatcgtgcgcgccaagcaggat
gttcttaacgaccagggtatcgaaggtcatcccattctgcccatcttgattcatggtgac
gccgcgtttgccgcacagggtatcgtcatggaaaccttgcagatggctaatctgcgtggc
tacactaccggcggcaccgtacacatcgtggtgaataaccagatcggcttcacaacatct
ccgaaggatggccgtaccgccaccaacgcaaccgatattgctcggatgaccaaggcgcct
gtcttccacgtaaacgccgatgaccccgaggctgtagttcgggcaggtcgtctcgcattc
gagtaccgcgagcgcttcggccgcgatgccgtaattgatttactctgctaccgtcgccgt
ggccacaacgaggctgatgacccgtcgatgactcagccgaagatgtaccaggtgatcgat
aatatgccttcgacccgcaccaagtatgcagaggctctggtgggtcgcggcgatatcacc
caagaagaagcagatgaggcattgagtgcataccactcgaagctggatgcgatcttcagc
gagacccaagcggccgtacccgctcccgagacccccaatgttgctgggcttgagctgcct
gcttctcagcagagcaccgaaattgttcatggcggtaacaccgcgatctctcgcgatacc
ttcgagcacatcgcaaaagcattcggcgaagttcccgagggcttcacggttcacaaaaag
ctcaagaaactgtgtgaacagcgcgttgagatgggcacaaacggcaaggtcaattggggc
atgggcgagcttctggcctttggctctctgctcatggaaggcaccgatgtgcgtatgagc
ggccaagacgttcaacgcggtaccttcgtgcagcgtcacgcggtgctgcatgatcatctc
accgatgacgaatggtcaccgctgcagcacctctcggaccatcagggcaagctacgtatc
tacaattcactcctgtctgagtacggtgtcataggcttcgagtatggatactcggttgaa
cgtcccgattcgatggtggtgtgggaggcccagttcggtgactttgcgaacggtgcccag
acgattatcgacgagttcgtgtcatcgtctgaacagaagtggggtcagcgttcttcgctg
gttcttctgctcccccacggttatgaggggcagggcccggaccactcatcagcgcgtata
gaacggtacctgcagttgtgcgctgaaaacaatatgacggttgctgtgccttctaccccg
gcatcgtatttccacctgttgcgtcgtcacgcacagcaccgcccgtataagccgcttgtg
gttattagccctaaacagctcttgcgtttgaaggctgcctcatcctcaattgaggacttc
acggaggggtcattccagcccgttattggcgatcgttccggtgttactccagcccaagtt
gagcgtgtagtctttgtctctggtcgtctctactacgatcttgaggctgagcgtgcaaag
cgcggtgatacgaaaaccgctatcgtctccgttgagcagctttaccccctgcccgaggca
gagatcaaggcgcagctggatttgtactcgaacgccaccgatattgtatgggcacaggat
gagcccgctaaccagggtcagtggccgtttatggctttgaacctgctgccaattattgac
taccggatgcgtttggtttcccgccctgcgtcggcatctcccgcagcaggtacgggtaaa
cgccatgccgctgaagctgaggcactgatgaagcaggtcttcgaaggctaa
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