Rothia dentocariosa: HMPREF0733_11008
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Entry
HMPREF0733_11008 CDS
T01343
Name
(GenBank) RHS repeat-associated core domain protein
Organism
rdn
Rothia dentocariosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
ADP40465
UniProt:
E3H3K3
LinkDB
All DBs
Position
complement(1075282..1081791)
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AA seq
2169 aa
AA seq
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MGVSGANNATSSVDFSKEAKAQDNVKFSNAAADTLRQALRTAGNNLTKSYGQAGGGGSSG
GRDQQFTESCADFTGKYSEEFKDRHEQLKANATNVAAMLLYAADLVDYFKECVARENRNR
QRARDWDDRWFWERWGNSIESIWNDDVGPGYEGAPAKPVAPSSIAAPAAPAPSSGVGTSS
AIPENLDVYVIRCNDDTNTHDREYRAINDAFAAFNAARDTSFGTLDISPAMMGLQTLNEQ
SGLVTDWLHKVAQAFRDAGASSGHPVALADSTLDAQVGPQVSINHIDVTLSQVSGEIPTS
GFANDPVNVATGNFIEPETDLVFTGTVSESTLSLTRMYNSLAVTHADEVPSGVFGLGWFS
TLDTHLSFGDEQASWFMPDGREVLFDREGEGFARAAREPWWLTKVPATDELFTRVRDAQV
HAYEQATVTGGSAVVPEVPFVWMVHNNQHEAYFYAPSGAPVARRQGHLSSLTVFILAEDG
AVTDLVHPVAHRGVHVNYEPAEETGGVRPAAAFTYNTIGERAGEPVQNVVYSYTEAAESS
ASVQVSGLLTGVTTGIGTRTYTHTERGLIHRVISVRGDLEVTNTYDDSGRVIGQISEYGR
DISYQYTPNVTTIIADADTGNNSNLWVSDAKGRLLSVTATDGTRMSMSYDRFSNRISITE
RDGSRTVRVSDERGHIKRERTPEGADYTYRWDEQDRLLSVSVRDARDVKNLSEPMPVHSY
RYEEGTLVVNPSPVAVLDGAGEATTWEYSPEGDILKISDPTGVYITLEYDEHHDIVALGD
VAGNTTRFTRDIAGQITSVTNPLGATTTLEYNEAGVISAVINPLGAKWSFVYPESPVGDG
TPYMAREQLQGRTRNSAVGTLPSAVINPDGATVEFTHTAGGDIATVTDAAGGITRREYDT
FGNLVKMITAGNRVWEYSWDGLSQLISLTDPTGAITRFEYDHAGEITQITDATGVISHRS
IDRHEGIESVAGTGEGLFSSAFCKVDVLGRVTEIGQQDGASTTSASSSNGTSEAPMGAGA
AGAGVAGTGIPHGVSSSAEAIAAAETAGAPSQPTGRQMFTYDAAGNIVEALDANGGLTRY
VRDAAGRVTRIISAAGRFTDYTYDTCGRLSSERVGLNEPVRVTDPVTGASSWEEPTRWAV
TTLVYDAASQVIERHTPDGLVEKMTYDAAGRLIKVQAGRRVATYTWDACNQLVRVQDSTF
GTRRYAYNELGHLVRVTDGLGNRTFFAYDADGLLTSVTDPTGAITEYEYDAAGRILEVAK
KPHPDSAVTTPAIRTTYTWDAAGRLLSEDDGVRTRSFEYDARTGDLTRTLIDGSLAAEYG
TGKPALPGSAITWMKDHTGDTPVTYRRVFDATGNLIEYTRQVDRIENTSDPGTAEALETF
TSTGSYTLTYAYDADGFRTMMLTPYGSSQWVLDGAGRPIRSINTASIADPGVRERESVIG
EFSYDVMGHLVRAQVGETISTWDFDQDGLVSSYEHTSEQGDENTAEGVQVIRDHTGRIIG
LDSTATGLVMYSYDEAGQLTGARADGYELTWVYEDGLMVAERLYHHDTTEDETTQGRVLL
GERQFIYNGLNQLLHCTTIERPYTVGEGVSAAWVSTEVSYTYNAAGQRTGQKSVTSDGVI
QERTYTWGITGALTTVSDTTTDVHGAEVPGLCSRLRIHADATGVATAITGNDRVTVPLLW
DPTSSAPHLLGAGSIPAAGADGGFSQAAVPGGFDPWSVPGVPNTGNMVGFGALSAPGAAA
LQAPGLPSALGAPGISGASALLTSVGLPEGVSFTGSGTLAVGGLALMGARVFDPSSKKFL
SQDPLPPIVGAGWFADSYSFLGHDPVGMIDPWGTAPLSHEDFKKYVDTQNTQTLYHIAGA
TIMAVSLVCGPAAPYVAIAGAGVYGVGDGTKMNADGTYDKGSMIKGGVTQAAIQATTFGL
GKAVTATGVGTMIGNGTSKAATYVGSKLPAVSGVTTKLASETGKKYATEAFASGVTNSAA
NTLGYIKDADHPTVAGATVNAVTGFGSGVLTHGIEQKVNSALPEMKTPTTLPGKVKYSLR
QEAVSRGSSLPGASLLEQPVQDKTVAHDQNGKDYSYLNSVGTGAYNKVVGTGIDNIATGT
GLKHLENDHGRYGVHYGAEPNEGFKDPETSKTPRHQKGVEGPRHRKEGPAKGPATSHRAP
GGYNTDLNK
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
gtgggggtatccggcgcgaacaacgccacttcatccgttgatttttcaaaagaagctaaa
gctcaagacaatgttaagtttagtaatgccgccgcagacactttaaggcaagctcttagg
actgcgggcaataatctcacgaaatcctacggacaggcaggtgggggtggctcttccggc
ggacgagatcaacaattcaccgaaagctgtgcagattttactgggaaatattcagaagaa
tttaaagataggcatgagcaacttaaagcaaacgctaccaacgttgctgcaatgctctta
tacgcggcagaccttgttgactatttcaaggaatgtgtggcccgcgaaaatcggaaccgt
caacgcgctcgtgattgggacgaccgttggttttgggaaaggtggggcaactccatagaa
agcatttggaatgacgatgtaggccctggctatgaaggtgcccccgccaaacctgttgcg
ccttcaagcatcgctgcccccgcagctccagcgccaagctctggggtaggaacttcttca
gctataccagaaaatttggacgtatatgttattcgctgcaacgatgacaccaatacacac
gatagggaatacagggccatcaatgacgcctttgcggcttttaatgcagcacgtgacaca
tccttcggaactttagatatatccccagctatgatgggtctgcaaactctcaatgagcag
agtggtctcgtcacagattggctccataaagttgctcaagcgttccgtgacgctggtgca
agttctggacacccagtggctcttgccgacagcactttggacgctcaggtaggcccacaa
gtttctattaatcatattgatgtcacactttcccaggtttctggtgaaataccgacctct
gggtttgcgaatgatccggtgaacgtggcgacaggtaactttatcgaaccggaaactgat
ctggtcttcaccgggacggtgagtgagtctacgttgtcgttgacgcgtatgtataacagt
ctggcggtcacccatgcggatgaggttccttcgggcgtgttcgggcttggctggttctcg
accttggatacccacctgagctttggggacgagcaggcctcgtggtttatgcctgacggg
cgtgaagtactctttgatcgggaaggcgaagggttcgcccgcgccgcccgggagccgtgg
tggctgacgaaggttcccgccacggatgaactgtttacccgggtgcgcgatgcgcaggtg
cacgcctacgagcaggctacagtcacgggtggttctgctgtggttcctgaggtcccgttt
gtgtggatggtgcacaataaccagcacgaagcgtatttctatgcgccctctggtgcgccg
gtggcgcgccgacaggggcacctgagcagcctgacagtgtttattctggctgaggatggt
gccgtgacggatctggtgcatccggtggcgcatcgcggtgttcatgtgaactatgagccc
gctgaggaaaccggtggcgtgcgcccagcggcggcattcacatacaacaccattggtgaa
cgtgccggggaaccggtgcagaacgttgtctattcctataccgaagctgctgaatccagt
gcctcggtgcaggtatctggcttgctcaccggagtaacaaccggtatcggaacgcgtacg
tatacgcatactgagcggggtttgattcaccgggtgattagcgtgcgcggcgatcttgag
gtcacgaacacctatgatgattccggtcgtgtgatagggcagattagcgaatacgggcga
gatatttcctaccagtacaccccaaatgtcacaaccattattgccgatgctgataccggc
aataattcaaacctgtgggtctctgatgccaaagggcgtttgctgagcgttacggcgact
gacggtacgcgcatgtcgatgagctatgatcggttcagcaaccggatcagcattaccgag
cgtgacgggtcacgaactgtgcgtgtctcagatgagcgtggtcatattaagcgtgagcgt
acccccgagggtgccgattacacctacaggtgggatgagcaagatcgtttgctctcagtg
agtgtgcgtgatgcccgagatgtgaaaaacctcagcgagcctatgccggtgcactcgtat
cggtacgaggaaggtaccctagtggtgaatccgagcccggtagctgttcttgatggtgcc
ggagaagctaccacgtgggagtattcccccgaaggcgatatcctgaaaattagcgaccca
acaggtgtgtacattaccctggagtatgatgagcaccacgatattgttgcattaggtgat
gttgctggcaatactacccgatttacccgagatatcgctggtcagataacctctgtcaca
aacccgctaggggccactaccacgcttgagtacaacgaagcaggtgtaatttctgccgtg
ataaatccgctgggtgccaagtggtcatttgtttaccccgagtcccctgttggtgatggc
accccctacatggctcgcgaacagttacaaggtcgtacccgtaattctgcagttggcaca
ttgcccagcgcagtcattaaccctgatggggcaactgttgagttcactcatacagcaggt
ggggatatcgcgaccgtcacagatgcggccggaggtataacccggcgtgagtacgatact
ttcgggaacctggtgaagatgatcaccgccggaaaccgggtgtgggagtattcttgggat
ggtttgtcccagttgattagcctgactgatcctactggagccatcacgcggttcgagtac
gatcatgctggagaaatcacacaaatcacggatgcgacgggggttatttcccaccggtcg
attgaccggcatgagggtattgagtctgttgctggtaccggtgagggtcttttctcgtcg
gcgttctgcaaggtggatgttcttgggcgggtgaccgaaatcggccagcaggatggtgcc
tccaccacatctgcgtcctcctcaaacggtacctctgaggcgcctatgggcgccggtgct
gccggtgcgggggttgccgggacgggtatcccgcatggagtatcctcctctgctgaggct
atcgcagccgctgagactgccggtgccccctcacagccaacaggtcggcagatgtttacg
tatgatgctgctgggaatatcgttgaagccctggacgctaatggtgggctcacacggtat
gtacgtgatgccgctggacgtgtcacccgcattattagtgctgcgggccggtttaccgat
tacacctacgacacctgcggaaggctgtcctctgagcgtgtggggcttaatgagcctgtg
cgggtgaccgatcccgtcaccggggcgtcctcgtgggaagaaccgacccggtgggctgta
acgacgctggtgtatgatgctgcctcgcaggtgatcgagcgacacacccctgacgggctt
gtggaaaagatgacttatgatgccgccgggcggttgataaaggttcaagcaggtcgccgc
gttgccacctatacgtgggatgcgtgcaaccagctggtgcgggtgcaggattccactttt
ggtacccgccgctacgcctataatgagctcggtcacctggtgcgggttaccgacggcttg
ggaaataggacattcttcgcctacgacgcggacgggctgctgacctcagtgacggatccg
actggggccatcaccgagtacgagtacgatgccgccggacgcatccttgaggttgcgaaa
aagcctcacccggacagcgccgttacgactccggctattcgcaccacctatacgtgggat
gccgccgggcgcctgctgtccgaagatgacggggttcgtacccgctccttcgagtacgat
gcccgcacgggtgatctgacccgcacgctcatcgacggctccctagctgctgagtacggc
acgggtaaacccgcgctaccgggatcagcaattacgtggatgaaggatcacaccggggat
accccggtgacgtaccggcgtgtctttgatgccaccgggaacctgatcgagtacacccgc
caggtcgatcggatcgagaataccagcgatcccggtacggctgaggccctggagacgttc
accagtacaggttcgtatacgctcacctatgcgtatgatgccgatgggttccgcacgatg
atgcttaccccctacgggtcttcccagtgggtgcttgatggtgccggacgcccgatccgc
tcaatcaacaccgcctcgattgctgaccctggtgtgcgtgagcgcgagtcggtcattggg
gagttctcctacgatgtgatggggcacctggtacgtgctcaggtcggcgaaacgatctcg
acctgggatttcgatcaggacgggttggtgtcctcctatgaacacaccagcgagcagggc
gatgagaacactgctgagggtgtgcaggtgatccgggaccacaccggccggattatcggg
cttgattccactgcgaccgggctggtgatgtactcctatgacgaggccggacagctgacc
ggtgctcgcgctgacgggtatgaactcacatgggtgtatgaggatggactcatggttgcc
gaacgcctctaccaccatgacaccaccgaggacgagaccactcagggcagggttctgctt
ggtgagcgtcagttcatctataacgggctcaaccagctgctgcactgcaccacgattgaa
cgaccttacacagtgggtgagggtgtttctgccgcgtgggtgagtaccgaagtgtcctac
acctataacgcagccggacaacgcaccgggcagaagagcgtcacctcggatggtgttatc
caagaacgcacctatacctggggtatcaccggtgctctgactaccgtcagcgatacaact
accgacgttcatggtgccgaggttccagggctgtgctcacgtcttcggatacacgccgac
gctaccggggttgccaccgcgatcactggtaacgatcgggtgacggtgccgctgctgtgg
gatccgacctcttctgccccgcatctgctgggggccggaagcatcccggctgcaggggct
gacggcgggttctcccaagcggcagtaccgggcgggtttgacccctggagtgtccccggg
gtacccaacaccgggaatatggtcggttttggtgccctgagcgcccccggtgctgctgcg
ttgcaggccccgggtctgcccagtgcgctcggcgctcctggcatttcgggtgcatccgcg
ctgcttaccagcgtgggactgccagaaggtgtgtccttcaccggctccggcacactcgcg
gtgggcgggcttgcgctgatgggcgcacgagtgtttgacccatcgtcgaagaagttcctc
tcccaagacccgttgccgcccatcgtaggtgcaggctggttcgcggactcgtactcattc
ctaggacatgaccctgtaggcatgatcgacccttggggaacagctccattaagccatgag
gatttcaaaaaatacgttgatacacagaatacacagactttgtaccatattgctggtgca
accattatggcggtaagtcttgtttgcggtcccgctgccccgtatgttgctatcgcaggg
gcaggtgtttacggcgtaggtgatggcaccaagatgaacgctgacgggacgtatgataaa
ggctcaatgattaagggaggcgttacgcaggcagcaatccaagcaaccacttttggactt
gggaaagcagtcaccgctacgggcgtaggtaccatgattggtaatggaacgagtaaggca
gctacctatgtcggttctaaacttccagcagtttcaggtgttaccactaagcttgcctct
gaaaccggtaaaaagtatgccactgaagcctttgcgagtggtgtgacaaacagtgccgca
aatactcttggctatattaaagatgctgaccaccctactgtggcgggggctactgtaaac
gcggtaacgggctttggttctggggtgcttacccacggaattgagcaaaaagtcaactct
gccctgccggagatgaaaactcctacaaccttacccggtaaggtgaaatactccctgagg
caggaagctgtatctcgtggatcaagcctgcctggagcaagtttactagagcagccggtt
caggataagacggtcgcccacgaccagaacggcaaggattacagttacttgaatagcgtc
gggactggggcctataacaaggtcgtgggtactggtatcgacaacatagcaaccggaaca
ggactcaaacaccttgaaaatgatcacggacgttatggagtgcattatggtgcagagcca
aatgagggtttcaaagatcccgaaacctcaaagactccacggcatcagaaaggagtagag
ggtcctaggcatcgtaaagaaggcccggctaaaggaccagccacttctcaccgggcacct
ggcggctacaatacggatcttaacaaataa
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