Rothia dentocariosa: HMPREF0733_12141
Help
Entry
HMPREF0733_12141 CDS
T01343
Name
(GenBank) D-ala D-ala ligase N-terminal domain protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00470
D-Amino acid metabolism
rdn00550
Peptidoglycan biosynthesis
rdn01100
Metabolic pathways
rdn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF0733_12141
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF0733_12141
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HMPREF0733_12141
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rdn01011
]
HMPREF0733_12141
Enzymes [BR:
rdn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HMPREF0733_12141
Peptidoglycan biosynthesis and degradation proteins [BR:
rdn01011
]
Precursor biosynthesis
Amino acid ligase
HMPREF0733_12141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
BiPBP_C
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ADP41598
UniProt:
E3H3M9
LinkDB
All DBs
Position
complement(2406340..2407464)
Genome browser
AA seq
374 aa
AA seq
DB search
MTENAQKKTVALLCGGRSSEHPISLITAVGVLGAIDSSVYDVVTIGITKDGRWYLTNLEE
LSALLDAAPAHAEFTGGSHQVFLPLGAGDSRVHLVDADGNLEYGPALDVVFPLIHGPFGE
DGTIQGLLELAELPYVGCGVTASAVGMDKHFMKVAFESAGLEVGSYEVVTDRQWTHEREE
SLKRITALGYPMFVKPTRAGSSFGITKVDKFEELVPAIEEARRHDAKIIVEAGIVGREIE
CGVLDGHHGNMPRASYPGEIEVVDEDHGFYDFDAKYISKSSAVTRCPADLPKDMQERLRA
LAVKAFLALDGEGLSRADFFYTPDGRLVINEVNTMPGFTPISMYKTMWENTGISYTELID
ELLTLALERPLGLR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaacgcacagaagaaaactgttgctctactgtgtggcggacgttcttcggaa
caccctatttctctgattactgccgtaggcgtgctaggcgccattgacagcagcgtctac
gacgtggtgactattggcattacaaaagacggtcgttggtatttgacgaatctggaagag
ctgagcgcacttctcgacgctgcccctgcacatgcagagtttacgggtggttcgcaccag
gttttcctgcctcttggagccggggattcgcgagtgcacctagtagatgctgacggaaat
cttgagtatggtcctgcccttgacgtggtattccccctcatacacggtcctttcggcgaa
gacggaacaattcagggtcttctggaacttgctgagttgccctatgtaggatgcggcgtg
acggcatcagccgtaggtatggataagcactttatgaaggttgcatttgagtcggctggg
ctggaggttgggtcttatgaggtggtgaccgatcgccaatggactcatgagcgcgaggaa
tcgcttaaacgtataaccgcccttggttaccccatgttcgttaaacccacgcgtgcgggt
tcttcttttggcattaccaaagtggataaatttgaggaacttgttccggctatcgaagaa
gcacgccgccatgacgcaaagattattgtggaagctggcattgtggggcgtgaaatcgag
tgtggcgtcttagacggtcaccacggtaatatgccgcgtgcatcataccctggcgaaatc
gaggttgttgatgaggaccacggtttctatgattttgatgctaaatatatctcaaagtct
tcggcagttacccggtgccccgccgatttaccgaaggatatgcaggagcgtttgcgtgct
ctggcggttaaggcgtttttggcccttgacggcgaaggactatcccgcgcagatttcttc
tacaccccggatggtcgtttggtgatcaacgaggtgaacactatgccaggatttaccccg
atttcaatgtacaaaaccatgtgggaaaacaccggaatttcctataccgaactgattgat
gaactgctgactcttgcactggagcgtcctttagggctgcgctaa
DBGET
integrated database retrieval system
