Roseateles depolymerans: RD2015_1228
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Entry
RD2015_1228 CDS
T04166
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00470
D-Amino acid metabolism
rdp00550
Peptidoglycan biosynthesis
rdp01100
Metabolic pathways
rdp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RD2015_1228
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RD2015_1228
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RD2015_1228
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rdp01011
]
RD2015_1228
Enzymes [BR:
rdp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RD2015_1228
Peptidoglycan biosynthesis and degradation proteins [BR:
rdp01011
]
Precursor biosynthesis
Amino acid ligase
RD2015_1228
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
Synapsin_C
Calmod_bind_C
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ALV05719
UniProt:
A0A0U3LLD2
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All DBs
Position
1411039..1412043
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AA seq
334 aa
AA seq
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MTLDLNIDVKKLGKVAVLFGGDSAEREVSLMSGAGVLGALRASGVDAHGFDPAERSLLAL
KDEGFDRAFIALHGRHGEDGTVQGALELLRIPYTGSGVMASAIAMDKITTKRVWVAEGLP
TPRWVSLKSQDLQRERVRTVPDELGLPLFVKPPHEGSSMGASKVMGYSDMQDAVQLAARF
DTEVLCEEFIDGQELTCAVLGEGDAALALPVIEIRAEQGNYDYQNKYFTDTTQYLIGQLP
ADQQAQIQALVLKAYRSLGCRGWGRADLMLRKSDGQAFLLEMNTSPGMTSHSLVPKAAAA
VGVSYEQLCLWLLAQATLDQKTPLSPLSPATPTT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacactggacctcaacatcgatgtgaagaagctcggcaaggtcgccgtgctgtttggg
ggcgactcggcggagcgcgaggtgtcgctcatgtcgggcgctggcgtgctgggcgcgctg
cgcgccagcggggtggatgcgcatggcttcgatccggcggagcgttcgctgctggcgctc
aaggatgagggattcgatcgcgccttcatcgccctgcatggtcgtcacggtgaggatggc
acggtgcaaggcgcactggagctgctgcgcattccctacaccggctctggcgtgatggcg
tcggccattgcgatggacaagatcaccaccaagcgggtgtgggtggccgaaggtctgccg
acgccgcgctgggtcagcctcaagagccaggacctgcagcgggaacgggtgcgcacggtg
ccggatgaactggggctgccgctcttcgtgaagccgccgcatgagggctcgtcgatgggc
gcgagcaaggtcatgggctactcggacatgcaggacgcggtccagctcgcggcgcggttc
gacaccgaagtgctctgcgaggaattcatcgacggccaggagctgacctgcgcggtgctg
ggcgagggcgatgccgcgctggcgctgccggtcatcgagatccgtgccgagcagggcaac
tacgactaccagaacaaatatttcaccgacaccacgcaatacctgatcggtcagctgcct
gcggaccaacaggcccagatccaggcgctggtgctcaaggcctaccgatcgttgggctgc
cggggctgggggcgtgccgacctgatgctgcgcaagagcgacggccaggccttcctgctg
gagatgaacacctcgccgggcatgacctcgcattcgctggtgcccaaggcggcggctgcg
gtgggcgtcagctacgagcagctgtgcctgtggctgctggcccaggcgacgctggaccag
aagacgccgctgtcgccgctgtcaccagcgacgccgacgacctga
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