KEGG   Roseateles depolymerans: RD2015_3116
Entry
RD2015_3116       CDS       T04166                                 
Name
(GenBank) Type III secretion outer membrane pore, YscC/HrcC family
  KO
K03219  type III secretion protein C
Organism
rdp  Roseateles depolymerans
Pathway
rdp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rdp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RD2015_3116
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rdp02044]
    RD2015_3116
Secretion system [BR:rdp02044]
 Type III secretion system
  Type III secretion core apparatus
   RD2015_3116
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0
Other DBs
NCBI-ProteinID: ALV07577
UniProt: A0A0U3MGQ1
LinkDB
Position
complement(3660687..3662717)
AA seq 676 aa
MTWAGAAPQGPGSGPSTPPTPSVPAAASATLVPSARSVTPAAGPSTVLPGAAQAPAAAAS
SPSNAAGRKPAAKAVKSTRAPSRQWRSARFIYKAEGKRVNEVLLDFAASQGLPAVVAEGI
DGTVQASFDMTPDQFLESMNRAYGVIWYHDGTALYFYPASAVQSRLFRLKGFRREQVTDL
LESLQLGDSRFPLRFNAAESTLLVYGPPRHVELIAAAIESLDVGAMERNRKAIRVVPLRF
ASAGDRVFGQTRIRGVASILTSLYSPGNAVTGPESEATSLVEVQPEKLRALQGVMGRDNR
LADVMARKPGQVTAGQASTPGAGSKGPGTHRGLESPVDDDAPPVFQADEGTNAVIIHGRP
QRMDEYVELIRRLDVQPVLVELEATIIDVSSDSIDSLGIDWSVRGSKGSFGVAQPNGGSS
GTFTLSTLWSNAGRELMARIDALSARGKARVIAKPKVLGVANRPAVMREKRVVTVKVAGN
LEANLYQVEAGTLLQVTPQITSVPDNGGVSRRIKLSLYIEDGNFETDRVDNVPIVKRTEI
MTEAHVGEGESLLIGGITTTSQSSQRDEVPVLGRVPVLGGLFRHTNEQAGQTERLFLISP
RVIREPSLAAETPVGRAGPPGSTGAVGSARTGLAGGATTSSSSSSPSLSAPALPPASAGT
GPAASMPGSFLQGSGG
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgacctgggccggtgccgcgccgcaggggccgggaagcggcccgtccacgccgccgacc
ccttctgtgcccgcagcggcatcggcgacattggtgccatccgcacggtcggtgactccc
gcagccggtccctcgacggtactgcctggcgcggcacaagctcccgcggcagcggcttct
tcgccgtccaacgccgccggcaggaagcccgccgccaaggccgtcaaatcgacacgcgcg
ccgtcgcggcagtggcgcagtgcccgcttcatctacaaggccgaaggcaagcgggtcaac
gaggtgctgttggacttcgccgccagccagggcttgccggcggtggtggccgaaggcatt
gacggcacggtgcaggccagcttcgacatgacgcccgaccagttcctggagtcgatgaac
cgtgcctacggggtcatctggtaccacgacggcacggcgctgtatttctatcccgccagc
gcggtgcagagccgtctgttccgcctcaagggtttccgccgtgagcaggtgaccgatctg
ctcgagtcgctgcaattgggcgactcgcggttcccgctgcgcttcaacgcggccgagagc
acgctgctggtttacggcccgccgcgccatgtggagctgatcgcggccgcgatcgaatcg
ctggatgtcggagcgatggagcgcaaccgcaaggccatccgcgtggtgcccctacgcttt
gcctccgccggcgaccgcgtgttcggacagacccgcatccgcggcgtggcctccatcctg
acctcgctctacagcccgggcaatgccgtcaccggtccggagtccgaagccaccagcctg
gtggaggtgcagcccgagaagctgcgcgccctgcaaggcgtgatgggccgggacaaccgg
ctggccgatgtgatggcccgcaagcccggccaggtcaccgccggccaggcttccacgccg
ggagccggcagcaaggggccgggcacccaccgcggcctggaaagcccggtcgatgacgac
gccccgcccgtcttccaggccgacgagggcaccaatgccgtgatcattcacggccgcccc
cagcgcatggacgaatatgtggagctgatccgccgcctggacgtccagccggtgttggtc
gagctggaagccaccatcatcgacgtgagcagcgacagcatcgactccctgggcatcgac
tggagcgtgcgcggcagcaagggcagctttggcgtggcccagcccaatggcggcagcagc
ggcaccttcacgctcagcaccttgtggtccaacgcaggccgcgagttgatggcccgcatc
gatgcgctcagcgcgcgcggcaaagcgcgtgtgattgccaagccgaaggtgctgggcgtg
gccaaccgtccggcagtgatgcgcgagaaacgcgtggtcacggtgaaggtggccggcaat
ctcgaggccaacctctatcaggtggaggcgggcacgctgctgcaggtcacgccgcagatc
acgtcggtgccggacaacggcggtgtgtcgcgccgcatcaagctgtcgctctacatcgag
gacggcaacttcgagaccgaccgggtcgacaacgtgcccatcgtcaagcgcacggagatc
atgaccgaagcgcatgtgggcgagggcgaaagcctgctgatcggtggcatcaccacgacc
agccagtcctcgcagcgggacgaggtgccggtgctgggccgcgtgccggtgctcggcggc
ctgttccgccacaccaatgaacaggcggggcagaccgagcggctgttcctcatctcgccg
cgggtcattcgcgagccctcgttggcggcggagacgcctgtcgggcgcgccgggccccct
ggatcgacgggcgccgtcggctcggcacggaccggcctcgccggtggcgcgacgacatcg
tcttcatcgtcgtctccatcgttgtctgcacccgcgctgccaccagcctccgcaggcacc
ggtcctgcagcgtcgatgccggggtccttcctgcaaggcagcggcggctga

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