Roseateles depolymerans: RD2015_979
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Entry
RD2015_979 CDS
T04166
Name
(GenBank) Pilus tip-associated protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rdp02044
]
RD2015_979
02035 Bacterial motility proteins [BR:
rdp02035
]
RD2015_979
Secretion system [BR:
rdp02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RD2015_979
Bacterial motility proteins [BR:
rdp02035
]
Pilus system
Pilus assembly proteins
RD2015_979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neisseria_PilC
Motif
Other DBs
NCBI-ProteinID:
ALV05474
UniProt:
A0A0U3LG66
LinkDB
All DBs
Position
complement(1108417..1112235)
Genome browser
AA seq
1272 aa
AA seq
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MNHIPPLSRRLGGAALATALTAALTTSMLASSLVQAQTKLADQPVLSATSVPGNLALALS
VEYPTAVSNTHQDTAYNPATNYIGYFDPNKCYNYVYSDVEADRYFQPAGKATNHLCNNKW
SGNFMNWASMQTIDPFRWALTGGARVKDTADTTIIEKAWASGQGGASNFPDRLINANITG
ATPLAFTQLKLRIQGLGNKMRFTQDGDNNNPKTLAAFNNPATPSTDTVYEVSVRVKVCEP
SEAAGGLEANCIKYSGGYKPEGLIQKYSDQVRFSAFGYLNDATVNRDGGVLRARMKFVGP
TQPVPGAPATNNSNAEWDAKTGIMAINPDPTDASSTANAYGITISNSGVMNYLNKFGTAT
SNYKTYDPVGELYYAALRYYRNLGNVPEYSNDNGASKATKEKYADGFPVITDWNDPILYS
CQKNFILGIGDVNTHADRNLPGATGNSEPAKPGAVTADTLDTVLWTNRVGTLQGIADLGT
KQNYNGCCTNNGALMAGMAYYANTTDIRSDLSGRQTIKTYWLDVQEYQKYVANNQFYLAA
KYGGFTAPTGYDPTNIAAKDFQDAWWHTGPATDKVGNQLRPDTYFTAAKADTMVDGLVTA
FASIGGSIKAPTSSFQTVDATLKIGEASYGTTYDASTWAGNVWAAGVRDIEVGATIKFDK
VSWNFADQLYAQMSATSDGWAQRRIVTINPTTQSGTSFLYNSLTAAQKTAVTPTWSKVAT
GDTYVKWLRGDQSNEQNAVGTGSLLAYRTRTANRLVGDIGESGVTVLGPPSLEDGSLSDA
GNPGYSSHAKTYANRPNIVLAGTNAGMVHVINGTLTGTTAGKELFAFVPNAAITGPSNTP
SVDGIAAVGNPDYAHRYLVNGKITVGEVDFNKTSGTSASGNDWRSIAVGGLGKGGRSVWA
LDLTTADSTSSEANAATRVLWEYTDANMGFVYGKPIITKIKGYGWVVVVGSGLNTPDGKG
AFVILNARTGQLLKRVALPTTGVTGTVDDGSTSNPTGLTYINAWHPDSSDLTAETIYGGD
LRGNLWRLDVSGGSTNIPAPVKIAKLTDINGKELSVTSAPKIHVDPSTGWRWVSVGTGRL
LSTDDINSTDLNRLYMIRDGGNNSYTATSLPTGVSYPILESNVGRHDLVDLSTSGSQLGN
TKAGFFIDLKTSLNTTGYRVISDADGYANYVLFAAIQPTTVNGGCSTSATSWAFLIDLAS
GGVYKEQVNFLATTARIVQFDGEVYATVSGNEDPKDPEKDVTENGDKALGKKLTGGGGTA
RLINWREIPLRN
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacattcctcccctttcacgtcggctcggcggcgcggccttggccaccgccctg
acggcggcgctgacgacgtccatgctggcatcgagcctggtccaggcccagaccaagctg
gcggaccagcccgtgctgtcggccacctcggtgccgggcaacctggccctggccctgtcg
gtggaatatccgacggccgtcagcaacacccaccaggacacggcctacaacccggcgacc
aactacatcggctacttcgatccgaacaagtgctacaactacgtgtattcggatgtagag
gctgatcgctacttccagccggcgggcaaggccaccaaccacttgtgcaataacaagtgg
agcggcaacttcatgaactgggcatcgatgcaaaccatcgacccgttccgctgggccctg
acgggcggcgcccgggtcaaagatactgcggacaccaccatcatcgagaaagcctgggcc
agcggccagggcggcgccagcaacttcccggaccggctgatcaacgccaacatcaccggc
gccacgcccctggccttcacgcagctcaagctgcggatccaggggctgggcaacaagatg
cgcttcacccaggacggtgacaacaacaaccccaagacgctggctgcgttcaacaatcca
gccacgccctccaccgacaccgtgtacgaagtgagcgtgcgggtgaaggtctgtgagccc
tcggaagctgccggcggccttgaggccaactgcatcaagtacagcggcggctacaagcct
gaaggtctgatccagaagtactccgatcaggtccgtttcagtgctttcggctacctcaac
gacgccacggtgaaccgcgacggcggcgtgctgcgcgcccgcatgaagtttgtcggcccc
acccagccggttcccggcgcgccggccaccaacaacagtaacgcggagtgggacgccaag
acgggcatcatggcgatcaatccggatccgacggatgcgtcaagcacggccaatgcctat
ggcatcaccatcagcaacagcggggtgatgaactacctgaacaagtttggcaccgccacc
agcaactacaagacctatgacccggtcggcgagttgtattacgcggccctgcgctattac
cgcaatctgggcaatgtgccggagtattcgaacgacaacggtgccagcaaagccaccaag
gaaaagtatgccgacggcttcccggtgatcaccgactggaatgatcccatcctctatagc
tgccagaagaacttcatcctgggcattggggacgtgaacacgcacgcggaccgtaatctc
ccaggcgccaccggcaactcggagccggccaagccgggcgcggtcacagcggacacgctg
gatacggtgctgtggacgaaccgcgtaggcacgctgcaaggcatcgccgacctgggcacc
aagcagaactacaacggttgctgcaccaacaacggcgcgttgatggccggcatggcctac
tacgccaacacgacggacatccggtcggacttgagcggccggcagaccatcaagacctac
tggctggacgtgcaggaataccagaagtacgtggccaacaaccagttctatctggcggcc
aagtacggcggcttcacggccccgaccggctacgatccgaccaacatcgctgccaaggac
ttccaggacgcctggtggcacacgggtccggcgacggacaaggttggcaaccagcttcgc
cccgacacgtacttcacggccgcaaaggctgacaccatggtggacggtctggtcacggcc
ttcgcgtcgatcggcggctccatcaaggcgcccacatcgtccttccagaccgtggacgcc
accctgaagatcggtgaagcctcttacggcaccacctacgatgcctccacctgggccggc
aacgtgtgggctgctggcgttcgcgacatcgaagtgggtgcgaccatcaagttcgacaag
gtcagctggaactttgctgaccagctgtacgcccagatgagtgccaccagcgacggttgg
gcccagcgacggatcgtcaccatcaaccccaccacccaaagcgggacgtccttcctctac
aacagcctgaccgccgcccagaagacggccgtcacgcccacctggagcaaggtggccact
ggcgacacctatgtgaagtggctgcgcggcgatcagtccaacgagcaaaatgcggtgggc
accggcagcttgctggcctatcgcacgcggaccgccaaccgcctggtcggcgacatcggc
gaaagcggcgtcacggtcctggggccgccttcgctggaagacggctcgctctccgacgcc
ggcaatccgggatattccagccacgccaagacgtacgccaaccggcccaatatcgtcctg
gccggcaccaacgccggcatggtgcatgtgatcaacggaaccttgaccggcaccaccgcg
ggcaaggaattgtttgccttcgtgcccaacgcggccatcaccggtcccagcaacaccccc
agcgtggacggcatcgccgccgtcggcaatccggactatgcgcaccgctacctggtgaac
ggcaagatcaccgtgggcgaagtggacttcaacaagacgtctggcaccagcgcctcgggc
aatgactggcgcagcatcgccgtgggcggtctgggcaagggtggccgcagcgtgtgggcc
ctggacctgacgacggcggattccacctcgtcggaggccaacgccgccacccgcgtgctg
tgggagtacaccgatgccaacatgggcttcgtctacggcaagccgatcatcaccaagatc
aagggctacggctgggtggtcgtggtgggctccggcctgaacacaccggacggcaagggt
gccttcgtgatcctcaatgcccgcacaggtcaactgctcaagcgcgtggccctgcccacg
acgggcgtgaccggtacggtcgacgacggctccacgtccaacccgactggcctgacctac
atcaacgcctggcatccggacagttcggacctgaccgccgaaacgatctatggcggcgac
ctgcgcggcaacctgtggcgcctggatgtgtcgggcggcagcaccaacatcccggccccg
gtgaagatcgccaagctgacggacatcaacggtaaggaactgtccgtgaccagtgccccc
aagattcacgtggaccccagtacgggttggcgctgggtctcggtcggtactggccgcctg
ctctccaccgacgacatcaacagcaccgacctgaaccggctctacatgattcgcgatggc
ggcaacaacagctacaccgccacgtcgctgcccactggcgtttcctatcccatcctggag
agcaatgtgggccgacatgacctggttgacctgagcacctcgggcagccaactgggcaac
accaaggccggcttcttcattgacctcaagacgtcgctcaacaccacgggctaccgggtg
atctcggatgctgacgggtacgccaactacgtgctgtttgcagccattcagccaacgacc
gtcaatggcggatgctcgacgtcggcaacgtcgtgggccttcctgattgatctggcgagc
ggcggtgtctacaaggaacaggtgaacttcctggccaccactgcgcggattgtgcaattt
gacggcgaggtgtatgccacggtgtcgggcaacgaagatcccaaggatccggagaaggat
gtgaccgagaacggcgacaaggcgctcggcaagaaactgaccgggggcggcggcacggct
cgcctgatcaactggcgcgaaatcccgctgcgcaactga
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