Rhodococcus erythropolis BG43: XU06_19400
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Entry
XU06_19400 CDS
T03842
Symbol
kgd
Name
(GenBank) alpha-ketoglutarate decarboxylase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb00020
Citrate cycle (TCA cycle)
reb00630
Glyoxylate and dicarboxylate metabolism
reb00785
Lipoic acid metabolism
reb01100
Metabolic pathways
reb01110
Biosynthesis of secondary metabolites
reb01120
Microbial metabolism in diverse environments
reb01200
Carbon metabolism
reb01210
2-Oxocarboxylic acid metabolism
Module
reb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
reb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XU06_19400 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
XU06_19400 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XU06_19400 (kgd)
Enzymes [BR:
reb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
XU06_19400 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
XU06_19400 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
XU06_19400 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
XU06_19400 (kgd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AKD98621
LinkDB
All DBs
Position
4288064..4291825
Genome browser
AA seq
1253 aa
AA seq
DB search
MSSSSTSQFGQNQWLVDEMYQRFQDDPSSVDPSWHEFLTDYSPDSANTGGGNGTASNGNA
AAPAAVVAPPAAPKATPPAPKTAPPAPPAKAAAPAPAKTAAPAAKAAPAKPAAAKPAAAP
AKPAPAGGAEETKVLRGAAAAVVKNMSLSLEIPTATSVRAIPAKLMFDNRIVINNHLART
RGGKISFTHLLGYAIVQAVNAFPNMNRHFAEIDGKPNAVTPEHTNLGLAIDLPGKDGNRS
LVVAAIRNTESMNFVQFHAAYEDIVRRAREGKLTGEDFTGVTISLTNPGGIGTVHSVPRL
MKGQGAIIGAGAMEYPAEFQGASDEKLAEMGVGKLMTLTSTYDHRIIQGAESGDFLRTIH
NLLISDEFYDEIFHALGNPYEPVRWRKDVPEGAVDKNTRVLELIAAYRDRGHLMADTDPL
QFVKDKFHSHPDLDVISHGLTLWDLDREFKVGGFHGQEKMKLRDVLSVLRDAYCRHVGVE
YTHILETDQRQWIQDRVEGHHAKPSVAQQKYILSKLNAAEAFETFLQTKYVGQKRFSLEG
AEAVIPMMDAVIDQAAEHQLDEVVIGMPHRGRLNVLANIVGKPYSKIFTEFEGNMNPAAA
HGSGDVKYHLGASGTYIQMFGDNDIAVSLTANPSHLEAVDPVLEGLVRAKQDILDKGEEG
FTVLPLMLHGDAAFAGQGVVAETLNLSLLRGYRTGGTVHIVVNNQVGFTTAPEHSRSSEY
CTDVAKMIAAPVFHVNGDDPEACVWVAQLAVDFREKFGKDVVIDLICYRRRGHNEGDDPS
MTQPAMYDVIDTKRSVRKSYTESLIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKFQ
PEPSESVELDQTPPARLTTAVAPEVLERIGDAFVNVPDGFTVHPRVKPVAEKRREMAREG
HVDWAFAELLAFGSLAEQGALIRLAGQDSKRGTFTQRHSVLIDRKTGNEYSPIAKIAADA
ENGGKFMVYDSALTEYAGLGFEYGYSVGNPDALVLWEAQFGDFVNGAQTIIDEFISSGEA
KWGQLSDVVLLLPHGHEGQGPDHTSGRIERFLQLCAEGSMTVAVPSTPASYFHLLRRHHL
DGIRRPLVVFTPKSMLRNKAAVSNVEDFTTGKFRSVFEEPAFESGESARESVKRVLLVSG
KLYWELLAKKHKDERDDIAIVRMEQLYPVPKRRLKETLDRYPNADQFRWVQEEPANQGAW
PFLGLALPDLLPETLTGIKRISRRPMSAPSSGSSKVHAVEQQEILDEAFLPTN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcagttctacatcccaattcggacagaaccagtggctggttgacgagatgtac
caacgcttccaggacgatccgtcgtccgtggatcccagttggcacgaattcttgaccgat
tactcgccggactcggcgaacacgggaggtggaaacgggactgcctcgaacggcaacgcg
gctgcacccgccgctgttgtagctccgcctgctgctcccaaggccacgcctcccgccccc
aagaccgcacctcctgcgccgcctgccaaggcggccgcaccggcccccgcgaagacggca
gcgcccgccgcgaaggccgccccggccaagcctgcagcagccaagcccgcggccgcaccc
gcgaagcccgctcccgccggcggagccgaggaaaccaaggttctccgcggcgccgcagca
gcggttgtcaagaacatgtcgctctcgctcgagattccgacagcaaccagcgtgcgtgcc
atccccgcgaagctgatgttcgacaaccgcatcgtcatcaacaaccacctcgcccgtacc
cgcggcggcaagatctcgttcacccacctcctgggttacgcgatcgtccaggcagtcaac
gcgttccccaacatgaaccggcacttcgccgaaatcgacggcaagccgaacgcggtcacg
cccgagcacaccaatctcggactcgcgatcgaccttcccggcaaggacggcaaccgctca
ctggttgttgccgccatccggaacaccgagtcgatgaacttcgttcagttccacgcggcg
tacgaggacatcgtccgacgcgcccgtgaaggcaagctcaccggcgaagacttcaccggc
gtcaccatttcgctgaccaacccgggcggcatcggcacggttcactccgttcctcgcctg
atgaagggccagggcgccatcatcggtgccggcgcgatggaataccccgccgagttccag
ggcgccagcgacgagaagctggccgagatgggcgtcggcaagttgatgactctcacctcg
acctacgatcaccgcatcatccagggtgccgagtcgggcgatttcctgcgcacgatccac
aacctgctgatcagcgacgagttctacgacgagatcttccacgcgctcggcaacccgtac
gagccggtgcgttggcgcaaggacgtgccggaaggcgctgtcgacaagaacacccgtgtt
ctcgaactgatcgctgcataccgtgaccgcggccacctcatggccgacacggacccgttg
cagttcgtcaaggacaagttccacagccaccccgacctcgacgtcatcagccacggcctg
acgctgtgggatctggaccgcgagttcaaggtcggcggcttccacggccaagagaagatg
aagctgcgcgacgtgttgagcgtgctgcgcgacgcgtactgccgccacgtcggtgtcgag
tacacgcacatcctcgagacggatcagcgtcagtggatccaggaccgcgtcgagggccat
cacgccaagccttcggtcgctcagcagaagtacatcctgagcaagctcaacgccgccgag
gccttcgagacgttcctgcagaccaagtacgtcggccagaagcgcttctcgctcgaagga
gccgaagccgtcatcccgatgatggacgccgtgatcgaccaggccgccgagcaccagctc
gacgaggtcgtcatcggaatgccgcaccgtggccgtctcaacgtgcttgccaacatcgtc
ggcaagccgtactccaagatcttcacggagttcgagggcaacatgaacccggcagccgct
cacggctccggcgacgtgaagtaccacctgggcgccagcggaacgtacatccagatgttc
ggtgacaacgacatcgctgtctccttgaccgccaacccgtctcacctcgaggccgtcgac
ccggttctcgaaggcctggtccgcgcaaagcaggacatcctcgacaagggcgaagaaggc
ttcaccgtcctgccgctcatgctgcacggtgacgctgcattcgccggtcagggcgttgtc
gccgagacgctgaacctctcgctgcttcgcggctaccgcaccggcggcaccgtacacatc
gtcgtgaacaaccaggtcggcttcaccaccgctccggaacattcacgctcgtccgagtac
tgcaccgacgtcgcgaagatgatcgccgcaccggtcttccacgtcaacggcgacgacccc
gaggcgtgcgtctgggttgctcagctggccgtcgacttccgtgagaagttcggcaaggac
gtcgtcatcgacctcatctgctaccgccgccgcggtcacaacgagggcgacgatccgtcg
atgacccagccggcgatgtacgacgtcatcgacaccaagcgcagcgtccgtaagagctac
accgagtccctcatcggccgcggtgacatctcgctcaaggaagccgaagacgcacttcgc
gactaccagggccagctcgaacgggtcttcaacgaggtccgtgaactcgagaagttccag
cccgaaccgtccgagtccgtcgaactcgaccagactcccccggctcgcctgaccacggct
gtcgctcccgaggtcctcgagcgcatcggtgatgcgttcgtcaacgtccccgacggcttc
accgttcacccgcgcgtcaagccggttgccgagaagcgccgcgaaatggcccgtgaggga
catgtcgactgggcgttcgcagaattgctcgcgttcggctcgttggccgagcagggtgcc
ttgatccgcctcgccggtcaggactccaagcgtggaacgttcacgcagcgtcactcggtc
ctcatcgaccgcaagaccggcaacgagtacagcccgatcgccaagatcgctgcagacgcc
gaaaacggcggcaagttcatggtctacgactccgcactcaccgagtacgcaggtctgggc
ttcgagtacggatactcggtgggtaaccccgacgctctggtcctgtgggaagcgcagttc
ggtgacttcgtcaacggcgcgcagaccatcatcgacgagttcatctcttcgggtgaggcc
aagtggggtcagctctccgacgtcgtgctgctcctgccacacggtcacgagggtcagggt
ccggaccacacctccggtcgcatcgagcgtttccttcagctgtgtgcagaaggctcgatg
accgtcgcggttccgtcgactccggccagctacttccacctgctgcgtcgccatcacctc
gacggcatccgccgtccgctggtggtcttcacgcccaagtcgatgctgcgtaacaaggct
gcagtcagcaacgtcgaggacttcacgacgggcaagttccgttcggtcttcgaggagcct
gcattcgagagcggcgaaagcgcccgcgaatcggtcaagcgggttctgctggtcagcggc
aagctgtactgggagcttctggcgaagaagcacaaggacgagcgtgacgacatcgcaatc
gtgcgcatggagcagctctaccccgtgccgaagcgtcgtctcaaggagaccctggaccgt
tacccgaatgcggatcagttccgttgggttcaggaagagcccgcaaaccagggtgcgtgg
ccgttcctcggactggctctgccggatcttctgccggagaccttgaccggcatcaagcgc
atctcgcgtcgtccgatgtccgctccctcttcgggatcgagcaaggtgcacgcggtggag
cagcaggagatcttggacgaggcgttcctgccgaccaactga
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