Rhizobium etli CIAT 652: RHECIAT_CH0003045
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Entry
RHECIAT_CH0003045 CDS
T00720
Name
(GenBank) probable ABC transporter, ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHECIAT_CH0003045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rec02000
]
RHECIAT_CH0003045
Transporters [BR:
rec02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RHECIAT_CH0003045
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
ABC_ATPase
SMC_N
AAA
AAA_22
sCache_3_2
Rad17
AAA_25
RsgA_GTPase
AAA_23
nSTAND3
NB-ARC
TniB
AAA_28
Rop
Motif
Other DBs
NCBI-ProteinID:
ACE91994
UniProt:
B3PUB3
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All DBs
Position
3055234..3056295
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AA seq
353 aa
AA seq
DB search
MSFLTLNNIQKSFGPVQVVKNFNMNIEKGEFVSFLGPSGCGKTTVLRMIAGFETPTGGTL
SINGKDQSSLKPNQRNIGMVFQAYALFPNMTVHDNVAFGLKVAGASKPEIDARVKEMLGL
IKLDHLADRFPYQMSGGQQQRVALARALAVKPQVLLLDEPLSALDAKIRVSLREEIRQIQ
QQLGITTVFVTHDQEEALSISDRIVVMNAGKADQIGSPFEIYNTPATRFVASFVGTLNLI
EAKVVDPDANLIQIGDQQITLKQSVAAHKAGETISLALRPEAGSLSDTARSDTALTGQVV
SAHFLGSVIRTRMNVGGNVISFDMFNSPGVTPPQAGETVTLRFMAADLLIIRD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttctcacactgaacaacatccagaaatccttcggcccggtgcaggtcgtcaag
aacttcaacatgaacatcgagaagggcgagttcgtctccttcctcggaccgtcgggctgc
ggcaagacgaccgttctgcgcatgatcgccggcttcgagacgccgaccggcggcacgctg
agcatcaacggcaaggaccagagttcgctgaaaccgaaccagcgcaatatcggcatggtc
ttccaagcctatgcgctatttccgaatatgacggtgcacgacaacgtcgccttcggcctg
aaggtcgccggcgcctccaagcctgagatcgacgcccgcgtcaaggaaatgctcggtctg
atcaagctcgaccatctggccgaccgcttcccctatcagatgtcgggcggccagcagcag
cgtgtcgcgctggcccgcgcgctcgccgtcaagccgcaggtactgctgctcgacgagccg
ctgtcggccctcgatgccaagatccgtgtgtcgctgcgcgaggaaatccgccagatccag
cagcagctcggcatcaccacggttttcgtcacccatgaccaggaagaggcgttgtcgatc
tccgaccgcatcgtcgtcatgaatgccggcaaggccgaccagatcggttcgcccttcgag
atctacaatacgccggcgacgcgcttcgtcgcctctttcgtcggtacgctgaacctcatc
gaggccaaggtcgtcgaccccgacgccaacctcatccagatcggggatcagcaaatcacg
ttgaagcagtcagtcgcagcccataaggccggcgagaccatctcgctggcgctacgcccg
gaagcgggctcgctctccgacacagccagaagcgatacggcgctgaccggccaggtcgtc
tcggctcacttcctggggtcggtcatccgcacccgcatgaatgtcggcggcaatgtcatc
tccttcgacatgttcaacagccctggcgtcaccccgccgcaagccggcgaaaccgtgacg
ctgcgtttcatggcagctgatctgctcatcattcgcgattga
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