Rhizobium etli CIAT 652: RHECIAT_PC0000233
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Entry
RHECIAT_PC0000233 CDS
T00720
Name
(GenBank) probable dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHECIAT_PC0000233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rec02000
]
RHECIAT_PC0000233
Transporters [BR:
rec02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHECIAT_PC0000233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_16
NACHT
AAA_29
Mg_chelatase
AAA
AAA_5
nSTAND1
AAA_33
MeaB
nSTAND3
NB-ARC
RNA_helicase
MMR_HSR1
Sigma54_activat
MobB
RsgA_GTPase
ATP-synt_ab
FtsK_SpoIIIE
AAA_23
DUF87
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
ACE94314
UniProt:
B3Q533
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All DBs
Position
pC:complement(232768..234477)
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AA seq
569 aa
AA seq
DB search
MSGSLLSVRDLTVRAHAEPGPRTLLDAVSLDLGKGEVLGLVGESGSGKSLLCRSLVRLLP
SSLLKIESGSVLLEGRDLVRVDDGEMLKVRGGEIGMIFQNPTSHLDPVMRVGEQIAEGIR
YHEGLGAREARTAATDILAQVGFPDPKRQYDSYPHEFSGGMRQRAMIGVALSCNPKILIA
DEPTTALDVTIQAQILRLLIDIRDRRGLSIILITHDLGIVAQTCDRIAVMRGGKLIEAGP
KRVILARPQHPYTVSLIDSHPSMSADTPTSSPEVAVANQTARPLLEIDDLHVQFRAGGGL
LKGGAKTVSAVSGVSLQIMAGETVGIVGESGSGKSTLARAVLGLTPLSSGHVTFEGVDLA
LQKGAGLAKLRRETAMVFQDPYNALNPRLTIGQMLAEVLQVQGKVAKADIPARIDALLDL
VGLEREFAGRKPRSMSGGQCQRAGIARALAVDPKMIIADECVAALDVTIQAQIIQLFREL
TAKMNLTLIFIAHDLAIVRNLCERVVVLYRGEIVEEGRCEEVFARPRHAYTAALIAAIPD
IDPDKPLLQGAGGKEDLQSIPIQPIKRMP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctcgctgctctccgtccgcgatctgactgtcagggcgcatgccgaacccggt
ccacgcacgctgctcgacgcggtgtcgctcgatctcggcaagggtgaggtcctcggtctc
gtcggcgagagcggttcgggcaagagcctgctctgccgctccctggtgcggttgctgccc
tcgtcgctcctgaagatcgaaagcggatccgtgttgctcgaaggacgcgacctcgtgcgg
gtagacgacggcgaaatgctgaaggtgcgcggcggcgagatcggcatgatcttccagaac
ccgaccagccatctcgacccggtgatgcgggtcggcgagcagatcgccgagggcatccgc
tatcacgaggggctcggcgcccgcgaggcccgcaccgctgcgacggatatcctggcgcag
gtcggcttccccgatccgaagcgtcagtacgacagctatccgcacgaattttccggcggc
atgcggcagcgggcgatgatcggcgtggctttgtcctgcaacccgaagatcctgattgcc
gacgagccgacgacggcgctcgatgtaaccatccaggcacagatcctgcggctgctgatc
gacattcgcgaccggcgcggactgtcgatcattctcattacccatgatcttggcatcgtc
gcacagacctgcgaccgcattgccgtgatgcgcggcggcaagctgattgaagcggggccg
aagcgggtgatcctggcacggccgcagcatccctatacagtcagcctaatcgacagccat
ccttcgatgtcagccgacactcccacgtcgtcgcccgaggtggcggtcgccaaccagacg
gcgcgaccactgcttgaaatcgacgatctccatgtgcagttcagagccggcggcggcctg
ctgaagggcggcgccaagacggtcagcgcggtttccggcgtcagcctgcagatcatggcc
ggggagacggtcggcatcgtcggtgaatccggcagcggtaagagcacgcttgcccgcgcc
gtgcttggccttacacccctttcctccggtcatgtcaccttcgagggcgtcgatctggcg
ctgcagaagggcgcgggcctggcaaaactcaggcgcgaaacggcgatggttttccaggac
ccctataacgctctcaatccgcgattgacgatcggtcagatgcttgccgaggtcctccaa
gtgcagggcaaggtggccaaggcggatatcccggcgcggatcgacgctttgctcgatctc
gtcggcctcgaacgcgaattcgccggccgcaaaccgcgcagcatgagcggcggccagtgc
cagcgtgccggcatcgcccgggcgctcgccgtcgacccgaaaatgatcattgccgatgaa
tgcgtcgccgctctcgacgtgaccattcaggcgcagatcatccagctcttccgcgaactc
accgcgaaaatgaacctgaccctgatcttcattgcccatgatctcgcgatcgtccgcaat
ctctgcgaacgcgtggtcgtcctgtatcgcggcgagatcgtcgaggaaggccgctgcgaa
gaggtgttcgcgcggcctaggcatgcctatacggcggcgctgatcgccgccattcccgac
atcgatcccgacaagccgctgctgcagggcgccggcggcaaggaggatctgcaatcgata
ccgatccagcccatcaaacgcatgccataa
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