Cupriavidus necator H16: H16_A3271
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Entry
H16_A3271 CDS
T00416
Symbol
ddlB
Name
(GenBank) D-Alanine-D-Alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
reh
Cupriavidus necator H16
Pathway
reh00470
D-Amino acid metabolism
reh00550
Peptidoglycan biosynthesis
reh01100
Metabolic pathways
reh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H16_A3271 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H16_A3271 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
H16_A3271 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
reh01011
]
H16_A3271 (ddlB)
Enzymes [BR:
reh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
H16_A3271 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
reh01011
]
Precursor biosynthesis
Amino acid ligase
H16_A3271 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
CPSase_L_D2
RimK
ATP-grasp_4
GARS_A
TTL
Motif
Other DBs
NCBI-ProteinID:
CAJ94345
UniProt:
Q0K6M6
LinkDB
All DBs
Position
1:complement(3535942..3536925)
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AA seq
327 aa
AA seq
DB search
MSFVAHPNIDPKSLGKVGVLLGGRSAEREISLMSGNGVLAALQSRGVDAHGFDPGLQSVA
ELAAAGFDRVFIALHGRYGEDGTIQGLLEQLGVPYTGSGVLASAMAMDKQATKRLWMTYG
LATPRFAMLHADTDFDAVAADLGLPLIVKPAREGSSIGLTKVTAADQMRAAFEKAAALDN
DVIAETFIDGAELTCPIVGEGDSAEALPVIRIVAPEANYDYQNKYFTDDTQYLCPSGLDP
EVEREVRALAVQSYRVLGCRGWARADLMLRADGKPFLLEMNTSPGMTGHSLVPMAARAVG
ISYEDFVMQVVAAATLDLHPNEHWKPE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgtggcccatcccaatatcgatcccaagtcgctgggcaaggtcggcgtgctg
ctgggcggacgctcggccgaacgcgagatctcgctgatgtctggcaacggcgtgctggcc
gcgctgcagtcgcgcggcgtggacgcgcacggcttcgacccgggcctgcagagcgtggcc
gagctggccgctgccggctttgaccgcgtctttatcgcactgcatggccgctatggcgag
gatggcaccatccagggcctgctcgagcagctgggcgtgccgtacaccggcagcggcgtg
ctggcatcagccatggccatggacaagcaggccaccaagcgcttgtggatgacctatggc
ctggccacgccgcgctttgccatgctgcatgcggacactgattttgatgccgtggcggcc
gacctgggcctgccgctgatcgtcaagccggcgcgcgagggctcgtcgatcggcctgacc
aaggtcactgccgccgaccagatgcgcgcggcgttcgagaaggccgcggcgctggacaac
gacgtcattgccgagacctttatcgacggcgccgaactgacctgcccgatcgtgggcgag
ggcgacagcgccgaagcgctgccggtgatccgcatcgttgcacccgaagccaactacgac
tatcaaaataagtactttactgacgatacccagtacttgtgcccgtcgggcctggatccc
gaagtcgaacgcgaggtccgggcgctggcggtgcagtcctaccgcgtgctgggctgccgc
ggctgggcgcgtgccgacctgatgctgcgcgccgacggcaagcctttcctgctcgagatg
aatacctcgcccggcatgaccggccattcgctggtgccgatggcggcgcgcgcggttggc
atcagctacgaggacttcgtgatgcaggtggtggccgcggccacgctggacctgcatccc
aacgagcattggaaacccgaataa
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