Rhizobium etli bv. mimosae Mim1: REMIM1_CH01768
Help
Entry
REMIM1_CH01768 CDS
T02778
Name
(GenBank) exodeoxyribonuclease III xth protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
REMIM1_CH01768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rel03400
]
REMIM1_CH01768
Enzymes [BR:
rel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
REMIM1_CH01768
DNA repair and recombination proteins [BR:
rel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
REMIM1_CH01768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
AGS21575
UniProt:
S5RW68
LinkDB
All DBs
Position
complement(1773845..1774627)
Genome browser
AA seq
260 aa
AA seq
DB search
MKIATYNVNGINGRLTNLLRWLKEDCPDVACLQELKTDDARFPRKELERAGYGAVWHGQR
SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAAVDGMLIGCLYLPNGNPFPGAKFEY
KLRWFRRLSAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWQDDALFRPEVRTAYAQL
VAQGWTDAVRHLHPGERIYTFWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSASVRRKPR
GWEHTSDHAPVMIELEAGGG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcaacctacaatgtcaacgggatcaacgggcgactgaccaatctgctgcgc
tggctgaaggaggattgtcccgatgtggcctgccttcaggaactgaaaaccgacgacgcc
aggtttccgcgaaaagagctcgaacgggccggctacggcgccgtctggcacggacagaga
tcctggaacggggtcgccattttggcaaagggtaagacgccgatcctgacccggcgcggt
ctgcccggcgatcccgacgacacccacagccgatatatcgaagctgccgtcgatggcatg
ctgatcggatgcctgtatctgccgaacggcaatccctttcccggcgccaagttcgaatac
aagctccgctggttccgtcgcctgagtgcctatgcagcagaactcctcgaaatcgaagtg
ccgtcgatcctggcgggggatttcaacgtcatgccgaccgagatcgacgtctacaagccg
gagcgctggcaggacgacgcgcttttcagaccggaagtccgcacggcctatgcacaactt
gtggcccagggctggacggatgcagtcaggcatctgcatcccggcgagcgcatctacaca
ttctggaaatactggcggaacagtttcgaacgcgatgctgggctgcggatcgatcacctt
ctgctcagcccgacggtggcgccctggcttcgatcggcaagtgtccgccgaaagccaagg
ggctgggagcataccagcgaccatgcgccggtcatgatcgagcttgaagctggcggcggc
tga
DBGET
integrated database retrieval system
