Rhizobium etli bv. mimosae Mim1: REMIM1_CH02891
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Entry
REMIM1_CH02891 CDS
T02778
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00470
D-Amino acid metabolism
rel00550
Peptidoglycan biosynthesis
rel01100
Metabolic pathways
rel01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
REMIM1_CH02891 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
REMIM1_CH02891 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
REMIM1_CH02891 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rel01011
]
REMIM1_CH02891 (ddl)
Enzymes [BR:
rel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
REMIM1_CH02891 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rel01011
]
Precursor biosynthesis
Amino acid ligase
REMIM1_CH02891 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
GARS_A
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
AGS22650
UniProt:
S5RYV8
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All DBs
Position
complement(2861932..2862858)
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AA seq
308 aa
AA seq
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MSRKHVAVLMGGFSSERPVSLSSGKACAEALEAEGFKVTTLDVARDVSEKLAALKPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKDKAKRVAAAAGVPVAESQVINR
FAFPATHPMKPPYVVKPVREGSSFGVVIVTEDQAHPPQVVSSPEWHYGEDVLVERYVYGR
ELTCGVMGDVALGVTEVVPLGHNFYDYDSKYAAGGSKHVIPAKISPNIYQKIQTLALRAH
QAIGCRGVSRSDFRYDDRLSDDGEIIWLEVNTQPGMTPTSLVPEMAGHAGYSFGQFLRWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaagcatgtcgctgtcctgatgggcggattttcctcggaaaggcctgtcagc
ctttcctcgggaaaggcttgcgcagaggccctcgaagccgaaggcttcaaggtaaccacg
cttgatgtcgcccgcgatgtttctgaaaagcttgccgcattgaagccggatgtcgtcttc
aatgcgcttcatgggccgttcggcgaggacgggaccattcagggcatcctggaatatctg
gagatcccctatacgcattcaggcgtgcttgcctcggcgcttgcgatggacaaggacaag
gcgaagcgtgtcgctgccgccgccggggtccctgtcgccgaatcgcaggtcatcaaccgt
ttcgcctttcctgcgacgcatccgatgaagccgccttatgtggtgaagccggtgcgcgaa
ggctcgagcttcggcgtcgtcatcgtcacggaagatcaggcgcatccgccgcaggtcgtc
agctcgcccgagtggcattatggcgaggacgttctcgtcgagcgctacgtttacggccgc
gagctcacctgcggagtcatgggtgatgtcgcgctcggcgtcacggaagtggtgccgctg
ggacacaatttttatgattacgattccaagtacgctgcgggcggttcaaaacacgtcatc
ccggcgaaaatttcaccgaatatttaccaaaaaatacaaacattggccctaagggcgcat
caggcaatcggttgccgcggcgtcagtcggtccgactttcgttacgacgatcgtctctcc
gacgacggcgaaatcatctggctggaagtcaatacccagcctggcatgactccaacctcg
ctcgtgcccgaaatggccggtcatgccggctattcgtttggtcagtttctccggtggatg
gtggaggacgcgtcttgtttgcgttga
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